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authorTae-Young Chung <ty83.chung@samsung.com>2018-03-13 17:04:17 +0900
committerTae-Young Chung <ty83.chung@samsung.com>2018-03-13 17:06:54 +0900
commit45032639c6c5ee11b79d2d3faaca6e9be6e4be3b (patch)
tree1d636d696c1f1ea6d79fb469758c465f27a3d37c /hl/c++
parent125c0b85df1bf388ae210fc7a87872984f865769 (diff)
downloadhdf5-master.tar.gz
hdf5-master.tar.bz2
hdf5-master.zip
Import upstream hdf5-1.10.1HEADupstream/1.10.1upstreammaster
Upstream repository is https://support.hdfgroup.org/ftp/HDF5/releases/hdf5-1.10/hdf5-1.10.1/src/ Change-Id: I4ec4c291940b7bb75722ea16813fbe55736374a6 Signed-off-by: Tae-Young Chung <ty83.chung@samsung.com>
Diffstat (limited to 'hl/c++')
-rw-r--r--hl/c++/CMakeLists.txt22
-rw-r--r--hl/c++/COPYING13
-rw-r--r--hl/c++/Makefile.am40
-rw-r--r--hl/c++/Makefile.in1444
-rw-r--r--hl/c++/examples/CMakeLists.txt26
-rw-r--r--hl/c++/examples/CMakeTests.cmake40
-rw-r--r--hl/c++/examples/Makefile.am50
-rw-r--r--hl/c++/examples/Makefile.in1362
-rw-r--r--hl/c++/examples/ptExampleFL.cpp101
-rw-r--r--hl/c++/examples/run-hlc++-ex.sh.in78
-rw-r--r--hl/c++/src/CMakeLists.txt79
-rw-r--r--hl/c++/src/H5PacketTable.cpp280
-rw-r--r--hl/c++/src/H5PacketTable.h217
-rw-r--r--hl/c++/src/Makefile.am41
-rw-r--r--hl/c++/src/Makefile.in1496
-rw-r--r--hl/c++/test/CMakeLists.txt31
-rw-r--r--hl/c++/test/CMakeTests.cmake32
-rw-r--r--hl/c++/test/Makefile.am37
-rw-r--r--hl/c++/test/Makefile.in1421
-rw-r--r--hl/c++/test/ptableTest.cpp693
-rw-r--r--hl/c++/test/ptableTest.h57
21 files changed, 7560 insertions, 0 deletions
diff --git a/hl/c++/CMakeLists.txt b/hl/c++/CMakeLists.txt
new file mode 100644
index 0000000..91bfa14
--- /dev/null
+++ b/hl/c++/CMakeLists.txt
@@ -0,0 +1,22 @@
+cmake_minimum_required (VERSION 3.2.2)
+PROJECT (HDF5_HL_CPP)
+
+#-----------------------------------------------------------------------------
+# Main HL lib is in /src
+#-----------------------------------------------------------------------------
+add_subdirectory (${HDF5_HL_CPP_SOURCE_DIR}/src ${HDF5_HL_CPP_BINARY_DIR}/src)
+
+# --------------------------------------------------------------------
+# Add in the examples for the Packet Table codes
+# --------------------------------------------------------------------
+if (HDF5_BUILD_EXAMPLES)
+ add_subdirectory (${HDF5_HL_CPP_SOURCE_DIR}/examples ${HDF5_HL_CPP_BINARY_DIR}/examples)
+endif ()
+
+# --------------------------------------------------------------------
+# Add in the unit tests for the packet table c++ wrapper
+# --------------------------------------------------------------------
+
+if (BUILD_TESTING)
+ add_subdirectory (${HDF5_HL_CPP_SOURCE_DIR}/test ${HDF5_HL_CPP_BINARY_DIR}/test)
+endif ()
diff --git a/hl/c++/COPYING b/hl/c++/COPYING
new file mode 100644
index 0000000..6497ace
--- /dev/null
+++ b/hl/c++/COPYING
@@ -0,0 +1,13 @@
+
+ Copyright by The HDF Group and
+ The Board of Trustees of the University of Illinois.
+ All rights reserved.
+
+ The files and subdirectories in this directory are part of HDF5.
+ The full HDF5 copyright notice, including terms governing use,
+ modification, and redistribution, is contained in the COPYING file
+ which can be found at the root of the source code distribution tree
+ or in https://support.hdfgroup.org/ftp/HDF5/releases. If you do
+ not have access to either file, you may request a copy from
+ help@hdfgroup.org.
+
diff --git a/hl/c++/Makefile.am b/hl/c++/Makefile.am
new file mode 100644
index 0000000..1968bf5
--- /dev/null
+++ b/hl/c++/Makefile.am
@@ -0,0 +1,40 @@
+#
+# Copyright by The HDF Group.
+# Copyright by the Board of Trustees of the University of Illinois.
+# All rights reserved.
+#
+# This file is part of HDF5. The full HDF5 copyright notice, including
+# terms governing use, modification, and redistribution, is contained in
+# the COPYING file, which can be found at the root of the source code
+# distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases.
+# If you do not have access to either file, you may request a copy from
+# help@hdfgroup.org.
+##
+## Makefile.am
+## Run automake to generate a Makefile.in from this file.
+#
+# High-Level API C++ Makefile(.in)
+#
+
+include $(top_srcdir)/config/commence.am
+
+SUBDIRS=src test
+DIST_SUBDIRS=src test examples
+
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+
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+
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+ if test $$d != X && test $$d != .; then \
+ (set -x; cd $$d && $(MAKE) $(AM_MAKEFLAGS) $@) || exit 1; \
+ fi; \
+ done
+
+include $(top_srcdir)/config/conclude.am
diff --git a/hl/c++/Makefile.in b/hl/c++/Makefile.in
new file mode 100644
index 0000000..30ce6b4
--- /dev/null
+++ b/hl/c++/Makefile.in
@@ -0,0 +1,1444 @@
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+
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+# with or without modifications, as long as this notice is preserved.
+
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+# but WITHOUT ANY WARRANTY, to the extent permitted by law; without
+# even the implied warranty of MERCHANTABILITY or FITNESS FOR A
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+
+@SET_MAKE@
+
+#
+# Copyright by The HDF Group.
+# Copyright by the Board of Trustees of the University of Illinois.
+# All rights reserved.
+#
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+# terms governing use, modification, and redistribution, is contained in
+# the COPYING file, which can be found at the root of the source code
+# distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases.
+# If you do not have access to either file, you may request a copy from
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+# Shell commands used in Makefiles
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+# We use RUNEXEC instead of RUNSERIAL directly because it may be that
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+ }; \
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+ echo "$(PACKAGE_STRING): $(subdir)/$(TEST_SUITE_LOG)" | \
+ $(am__rst_title); \
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+ echo "$${col}Testsuite summary for $(PACKAGE_STRING)$${std}"; \
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+ || cp -p $$d/$$file "$(distdir)/$$file" \
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+ @list='$(DIST_SUBDIRS)'; for subdir in $$list; do \
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+ @$(MAKE) $(AM_MAKEFLAGS) install-exec-am install-data-am
+
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+ $(MAKE) $(AM_MAKEFLAGS) INSTALL_PROGRAM="$(INSTALL_STRIP_PROGRAM)" \
+ install_sh_PROGRAM="$(INSTALL_STRIP_PROGRAM)" INSTALL_STRIP_FLAG=-s \
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+ fi
+mostlyclean-generic:
+ -test -z "$(TEST_LOGS)" || rm -f $(TEST_LOGS)
+ -test -z "$(TEST_LOGS:.log=.trs)" || rm -f $(TEST_LOGS:.log=.trs)
+ -test -z "$(TEST_SUITE_LOG)" || rm -f $(TEST_SUITE_LOG)
+
+clean-generic:
+
+distclean-generic:
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+ -test . = "$(srcdir)" || test -z "$(CONFIG_CLEAN_VPATH_FILES)" || rm -f $(CONFIG_CLEAN_VPATH_FILES)
+
+maintainer-clean-generic:
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+ @echo "it deletes files that may require special tools to rebuild."
+clean: clean-recursive
+
+clean-am: clean-generic clean-libtool mostlyclean-am
+
+distclean: distclean-recursive
+ -rm -f Makefile
+distclean-am: clean-am distclean-generic distclean-tags
+
+dvi: dvi-recursive
+
+dvi-am:
+
+html: html-recursive
+
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+
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+ mostlyclean-local
+
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+.MAKE: $(am__recursive_targets) check-am install-am install-strip
+
+.PHONY: $(am__recursive_targets) CTAGS GTAGS TAGS all all-am all-local \
+ check check-TESTS check-am clean clean-generic clean-libtool \
+ cscopelist-am ctags ctags-am distclean distclean-generic \
+ distclean-libtool distclean-tags distdir dvi dvi-am html \
+ html-am info info-am install install-am install-data \
+ install-data-am install-dvi install-dvi-am install-exec \
+ install-exec-am install-html install-html-am install-info \
+ install-info-am install-man install-pdf install-pdf-am \
+ install-ps install-ps-am install-strip installcheck \
+ installcheck-am installcheck-local installdirs installdirs-am \
+ maintainer-clean maintainer-clean-generic mostlyclean \
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+ pdf-am ps ps-am recheck tags tags-am uninstall uninstall-am
+
+.PRECIOUS: Makefile
+
+
+# List all build rules defined by HDF5 Makefiles as "PHONY" targets here.
+# This tells the Makefiles that these targets are not files to be built but
+# commands that should be executed even if a file with the same name already
+# exists.
+.PHONY: build-check-clean build-check-p build-check-s build-lib build-progs \
+ build-tests check-clean check-install check-p check-s check-vfd \
+ install-doc lib progs tests uninstall-doc _exec_check-s _test help
+
+help:
+ @$(top_srcdir)/bin/makehelp
+
+# Install examples
+install-examples uninstall-examples:
+ @(cd examples && $(MAKE) $(AM_MAKEFLAGS) $@) || exit 1;
+
+installcheck-local:
+ @(cd examples && $(MAKE) $(AM_MAKEFLAGS) $@) || exit 1;
+
+# Clean examples when check-clean is invoked
+check-clean ::
+ @$(MAKE) $(AM_MAKEFLAGS) build-$@ || exit 1;
+ @for d in X $(SUBDIRS) examples; do \
+ if test $$d != X && test $$d != .; then \
+ (set -x; cd $$d && $(MAKE) $(AM_MAKEFLAGS) $@) || exit 1; \
+ fi; \
+ done
+
+# lib/progs/tests targets recurse into subdirectories. build-* targets
+# build files in this directory.
+build-dyn: $(DYN)
+build-lib: $(LIB)
+build-progs: $(LIB) $(PROGS)
+build-tests: $(LIB) $(PROGS) $(chk_TESTS)
+
+# General rule for recursive building targets.
+# BUILT_SOURCES contain targets that need to be built before anything else
+# in the directory (e.g., for Fortran type detection)
+lib dyn progs tests check-s check-p :: $(BUILT_SOURCES)
+ @$(MAKE) $(AM_MAKEFLAGS) build-$@ || exit 1;
+ @for d in X $(SUBDIRS); do \
+ if test $$d != X && test $$d != .; then \
+ (set -x; cd $$d && $(MAKE) $(AM_MAKEFLAGS) $@) || exit 1; \
+ fi; \
+ done
+
+# General rule for recursive cleaning targets. Like the rule above,
+# but doesn't require building BUILT_SOURCES.
+check-clean ::
+ @$(MAKE) $(AM_MAKEFLAGS) build-$@ || exit 1;
+ @for d in X $(SUBDIRS); do \
+ if test $$d != X && test $$d != .; then \
+ (set -x; cd $$d && $(MAKE) $(AM_MAKEFLAGS) $@) || exit 1; \
+ fi; \
+ done
+
+# Tell Automake to build tests when the user types `make all' (this is
+# not its default behavior). Also build EXTRA_LIB and EXTRA_PROG since
+# Automake won't build them automatically, either.
+all-local: $(EXTRA_LIB) $(EXTRA_PROG) $(chk_TESTS)
+
+# make install-doc doesn't do anything outside of doc directory, but
+# Makefiles should recognize it.
+# UPDATE: docs no longer reside in this build tree, so this target
+# is depreciated.
+install-doc uninstall-doc:
+ @echo "Nothing to be done."
+
+# clean up files generated by tests so they can be re-run.
+build-check-clean:
+ $(RM) -rf $(CHECK_CLEANFILES)
+
+# run check-clean whenever mostlyclean is run
+mostlyclean-local: build-check-clean
+
+# check-install is just a synonym for installcheck
+check-install: installcheck
+
+# Run each test in order, passing $(TEST_FLAGS) to the program.
+# Since tests are done in a shell loop, "make -i" does apply inside it.
+# Set HDF5_Make_Ignore to a non-blank string to ignore errors inside the loop.
+# The timestamps give a rough idea how much time the tests use.
+#
+# Note that targets in chk_TESTS (defined above) will be built when the user
+# types 'make tests' or 'make check', but only programs in TEST_PROG,
+# TEST_PROG_PARA, or TEST_SCRIPT will actually be executed.
+check-TESTS: test
+
+test _test:
+ @$(MAKE) build-check-s
+ @$(MAKE) build-check-p
+
+# Actual execution of check-s.
+build-check-s: $(LIB) $(PROGS) $(chk_TESTS)
+ @if test -n "$(TEST_PROG)$(TEST_SCRIPT)"; then \
+ echo "===Serial tests in `echo ${PWD} | sed -e s:.*/::` begin `date`==="; \
+ fi
+ @$(MAKE) $(AM_MAKEFLAGS) _exec_check-s
+ @if test -n "$(TEST_PROG)$(TEST_SCRIPT)"; then \
+ echo "===Serial tests in `echo ${PWD} | sed -e s:.*/::` ended `date`===";\
+ fi
+
+_exec_check-s: $(TEST_PROG_CHKEXE) $(TEST_SCRIPT_CHKSH)
+
+# The dummy.chkexe here prevents the target from being
+# empty if there are no tests in the current directory.
+# $${log} is the log file.
+# $${tname} is the name of test.
+$(TEST_PROG_CHKEXE) $(TEST_PROG_PARA_CHKEXE) dummy.chkexe_:
+ @if test "X$@" != "X.chkexe_" && test "X$@" != "Xdummy.chkexe_"; then \
+ tname=$(@:.chkexe_=)$(EXEEXT);\
+ log=$(@:.chkexe_=.chklog); \
+ echo "============================"; \
+ if $(top_srcdir)/bin/newer $(@:.chkexe_=.chkexe) $${tname}; then \
+ echo "No need to test $${tname} again."; \
+ else \
+ echo "============================" > $${log}; \
+ if test "X$(FORTRAN_API)" = "Xyes"; then \
+ echo "Fortran API: Testing $(HDF5_DRIVER) $${tname} $(TEST_FLAGS)"; \
+ echo "Fortran API: $(HDF5_DRIVER) $${tname} $(TEST_FLAGS) Test Log" >> $${log}; \
+ elif test "X$(CXX_API)" = "Xyes"; then \
+ echo "C++ API: Testing $(HDF5_DRIVER) $${tname} $(TEST_FLAGS)"; \
+ echo "C++ API: $(HDF5_DRIVER) $${tname} $(TEST_FLAGS) Test Log" >> $${log};\
+ else \
+ echo "Testing $(HDF5_DRIVER) $${tname} $(TEST_FLAGS)"; \
+ echo "$(HDF5_DRIVER) $${tname} $(TEST_FLAGS) Test Log" >> $${log}; \
+ fi; \
+ echo "============================" >> $${log}; \
+ srcdir="$(srcdir)" \
+ $(TIME) $(RUNEXEC) ./$${tname} $(TEST_FLAGS) >> $${log} 2>&1 \
+ && touch $(@:.chkexe_=.chkexe) || \
+ (test $$HDF5_Make_Ignore && echo "*** Error ignored") || \
+ (cat $${log} && false) || exit 1; \
+ echo "" >> $${log}; \
+ echo "Finished testing $${tname} $(TEST_FLAGS)" >> $${log}; \
+ echo "============================" >> $${log}; \
+ echo "Finished testing $${tname} $(TEST_FLAGS)"; \
+ cat $${log}; \
+ fi; \
+ fi
+
+# The dummysh.chkexe here prevents the target from being
+# empty if there are no tests in the current directory.
+# $${log} is the log file.
+# $${tname} is the name of test.
+$(TEST_SCRIPT_CHKSH) $(TEST_SCRIPT_PARA_CHKSH) dummysh.chkexe_:
+ @if test "X$@" != "X.chkexe_" && test "X$@" != "Xdummysh.chkexe_"; then \
+ cmd=$(@:.chkexe_=);\
+ tname=`basename $$cmd`;\
+ chkname=`basename $(@:.chkexe_=.chkexe)`;\
+ log=`basename $(@:.chkexe_=.chklog)`; \
+ echo "============================"; \
+ if $(top_srcdir)/bin/newer $${chkname} $$cmd $(SCRIPT_DEPEND); then \
+ echo "No need to test $${tname} again."; \
+ else \
+ echo "============================" > $${log}; \
+ if test "X$(FORTRAN_API)" = "Xyes"; then \
+ echo "Fortran API: Testing $${tname} $(TEST_FLAGS)"; \
+ echo "Fortran API: $${tname} $(TEST_FLAGS) Test Log" >> $${log}; \
+ elif test "X$(CXX_API)" = "Xyes"; then \
+ echo "C++ API: Testing $${tname} $(TEST_FLAGS)"; \
+ echo "C++ API: $${tname} $(TEST_FLAGS) Test Log" >> $${log}; \
+ else \
+ echo "Testing $${tname} $(TEST_FLAGS)"; \
+ echo "$${tname} $(TEST_FLAGS) Test Log" >> $${log}; \
+ fi; \
+ echo "============================" >> $${log}; \
+ RUNSERIAL="$(RUNSERIAL)" RUNPARALLEL="$(RUNPARALLEL)" \
+ srcdir="$(srcdir)" \
+ $(TIME) $(SHELL) $$cmd $(TEST_FLAGS) >> $${log} 2>&1 \
+ && touch $${chkname} || \
+ (test $$HDF5_Make_Ignore && echo "*** Error ignored") || \
+ (cat $${log} && false) || exit 1; \
+ echo "" >> $${log}; \
+ echo "Finished testing $${tname} $(TEST_FLAGS)" >> $${log}; \
+ echo "============================" >> $${log}; \
+ echo "Finished testing $${tname} $(TEST_FLAGS)"; \
+ cat $${log}; \
+ fi; \
+ echo "============================"; \
+ fi
+
+# Actual execution of check-p.
+build-check-p: $(LIB) $(PROGS) $(chk_TESTS)
+ @if test -n "$(TEST_PROG_PARA)$(TEST_SCRIPT_PARA)"; then \
+ echo "===Parallel tests in `echo ${PWD} | sed -e s:.*/::` begin `date`==="; \
+ fi
+ @if test -n "$(TEST_PROG_PARA)"; then \
+ echo "**** Hint ****"; \
+ echo "Parallel test files reside in the current directory" \
+ "by default."; \
+ echo "Set HDF5_PARAPREFIX to use another directory. E.g.,"; \
+ echo " HDF5_PARAPREFIX=/PFS/user/me"; \
+ echo " export HDF5_PARAPREFIX"; \
+ echo " make check"; \
+ echo "**** end of Hint ****"; \
+ fi
+ @for test in $(TEST_PROG_PARA) dummy; do \
+ if test $$test != dummy; then \
+ $(MAKE) $(AM_MAKEFLAGS) $$test.chkexe_ \
+ RUNEXEC="$(RUNPARALLEL)" || exit 1; \
+ fi; \
+ done
+ @for test in $(TEST_SCRIPT_PARA) dummy; do \
+ if test $$test != dummy; then \
+ $(MAKE) $(AM_MAKEFLAGS) $$test.chkexe_ || exit 1; \
+ fi; \
+ done
+ @if test -n "$(TEST_PROG_PARA)$(TEST_SCRIPT_PARA)"; then \
+ echo "===Parallel tests in `echo ${PWD} | sed -e s:.*/::` ended `date`===";\
+ fi
+
+# Run test with different Virtual File Driver
+check-vfd: $(LIB) $(PROGS) $(chk_TESTS)
+ @for vfd in $(VFD_LIST) dummy; do \
+ if test $$vfd != dummy; then \
+ echo "============================"; \
+ echo "Testing Virtual File Driver $$vfd"; \
+ echo "============================"; \
+ $(MAKE) $(AM_MAKEFLAGS) check-clean || exit 1; \
+ HDF5_DRIVER=$$vfd $(MAKE) $(AM_MAKEFLAGS) check || exit 1; \
+ fi; \
+ done
+
+# Tell versions [3.59,3.63) of GNU make to not export all variables.
+# Otherwise a system limit (for SysV at least) may be exceeded.
+.NOEXPORT:
diff --git a/hl/c++/examples/CMakeLists.txt b/hl/c++/examples/CMakeLists.txt
new file mode 100644
index 0000000..33ad1e5
--- /dev/null
+++ b/hl/c++/examples/CMakeLists.txt
@@ -0,0 +1,26 @@
+cmake_minimum_required (VERSION 3.2.2)
+PROJECT (HDF5_HL_CPP_EXAMPLES)
+
+#-----------------------------------------------------------------------------
+# Setup include Directories
+#-----------------------------------------------------------------------------
+INCLUDE_DIRECTORIES (${HDF5_HL_SRC_DIR}/src)
+INCLUDE_DIRECTORIES (${HDF5_HL_CPP_SRC_DIR}/src)
+
+# --------------------------------------------------------------------
+# Add in the examples for the Packet Table codes
+# --------------------------------------------------------------------
+add_executable (ptExampleFL ${HDF5_HL_CPP_EXAMPLES_SOURCE_DIR}/ptExampleFL.cpp)
+TARGET_NAMING (ptExampleFL STATIC)
+TARGET_C_PROPERTIES (ptExampleFL STATIC " " " ")
+target_link_libraries (
+ ptExampleFL
+ ${HDF5_HL_CPP_LIB_TARGET}
+ ${HDF5_HL_LIB_TARGET}
+ ${HDF5_LIB_TARGET}
+)
+set_target_properties (ptExampleFL PROPERTIES FOLDER examples/hl/cpp)
+
+if (BUILD_TESTING)
+ include (CMakeTests.cmake)
+endif ()
diff --git a/hl/c++/examples/CMakeTests.cmake b/hl/c++/examples/CMakeTests.cmake
new file mode 100644
index 0000000..103ec2b
--- /dev/null
+++ b/hl/c++/examples/CMakeTests.cmake
@@ -0,0 +1,40 @@
+#
+# Copyright by The HDF Group.
+# All rights reserved.
+#
+# This file is part of HDF5. The full HDF5 copyright notice, including
+# terms governing use, modification, and redistribution, is contained in
+# the COPYING file, which can be found at the root of the source code
+# distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases.
+# If you do not have access to either file, you may request a copy from
+# help@hdfgroup.org.
+#
+
+##############################################################################
+##############################################################################
+### T E S T I N G ###
+##############################################################################
+##############################################################################
+# Remove any output file left over from previous test run
+add_test (
+ NAME HL_CPP_ex_ptExampleFL-clear-objects
+ COMMAND ${CMAKE_COMMAND}
+ -E remove
+ PTcppexampleFL.h5
+)
+
+if (HDF5_ENABLE_USING_MEMCHECKER)
+ add_test (NAME HL_CPP_ex_ptExampleFL COMMAND $<TARGET_FILE:ptExampleFL>)
+else ()
+ add_test (NAME HL_CPP_ex_ptExampleFL COMMAND "${CMAKE_COMMAND}"
+ -D "TEST_PROGRAM=$<TARGET_FILE:ptExampleFL>"
+ -D "TEST_ARGS:STRING="
+ -D "TEST_EXPECT=0"
+ -D "TEST_SKIP_COMPARE=TRUE"
+ -D "TEST_OUTPUT=ptExampleFL.txt"
+ #-D "TEST_REFERENCE=ptExampleFL.out"
+ -D "TEST_FOLDER=${PROJECT_BINARY_DIR}"
+ -P "${HDF_RESOURCES_EXT_DIR}/runTest.cmake"
+ )
+endif ()
+set_tests_properties (HL_CPP_ex_ptExampleFL PROPERTIES DEPENDS HL_CPP_ex_ptExampleFL-clear-objects)
diff --git a/hl/c++/examples/Makefile.am b/hl/c++/examples/Makefile.am
new file mode 100644
index 0000000..ce719f5
--- /dev/null
+++ b/hl/c++/examples/Makefile.am
@@ -0,0 +1,50 @@
+#
+# Copyright by The HDF Group.
+# Copyright by the Board of Trustees of the University of Illinois.
+# All rights reserved.
+#
+# This file is part of HDF5. The full HDF5 copyright notice, including
+# terms governing use, modification, and redistribution, is contained in
+# the COPYING file, which can be found at the root of the source code
+# distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases.
+# If you do not have access to either file, you may request a copy from
+# help@hdfgroup.org.
+##
+## Makefile.am
+## Run automake to generate a Makefile.in from this file.
+##
+#
+# HDF5 Library Examples Makefile(.in)
+#
+
+include $(top_srcdir)/config/commence.am
+
+# These are the programs that 'make all' or 'make prog' will build and
+# which 'make check' will run. List them in the order they should be run.
+EXAMPLE_PROG=ptExampleFL
+TEST_EXAMPLES_SCRIPT=$(INSTALL_SCRIPT_FILES)
+
+# These are the example files to be installed
+INSTALL_FILES=ptExampleFL.cpp
+INSTALL_SCRIPT_FILES = run-hlc++-ex.sh
+
+# Tell conclude.am that these are C++ tests.
+CXX_API=yes
+
+# Where to install examples
+# Note: no '/' after DESTDIR. Explanation in commence.am
+EXAMPLEDIR=${DESTDIR}$(exec_prefix)/share/hdf5_examples/hl/c++
+EXAMPLETOPDIR=${DESTDIR}$(exec_prefix)/share/hdf5_examples/hl
+
+# How to build programs using h5c++
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+ $(H5CPP) $(H5CCFLAGS) $(CPPFLAGS) -o $@ $(srcdir)/$@.cpp
+
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+# care of this for us, but if we tell automake about the programs it
+# will try to build them with the normal C++ compiler, not h5c++. This is
+# an inelegant way of solving the problem, unfortunately.
+ptExampleFL: ptExampleFL.cpp
+
+include $(top_srcdir)/config/examples.am
+include $(top_srcdir)/config/conclude.am
diff --git a/hl/c++/examples/Makefile.in b/hl/c++/examples/Makefile.in
new file mode 100644
index 0000000..db09144
--- /dev/null
+++ b/hl/c++/examples/Makefile.in
@@ -0,0 +1,1362 @@
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+
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+# but WITHOUT ANY WARRANTY, to the extent permitted by law; without
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+
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+
+#
+# Copyright by The HDF Group.
+# Copyright by the Board of Trustees of the University of Illinois.
+# All rights reserved.
+#
+# This file is part of HDF5. The full HDF5 copyright notice, including
+# terms governing use, modification, and redistribution, is contained in
+# the COPYING file, which can be found at the root of the source code
+# distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases.
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+#
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+# Shell commands used in Makefiles
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+# Some machines need a command to run executables; this is that command
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+# Note that in svn revision 19400 the '/' after DESTDIR in H5* variables below
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+# The trace script; this is used on source files from the C library to
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+check-am: all-am
+ $(MAKE) $(AM_MAKEFLAGS) check-TESTS
+check: check-am
+all-am: Makefile all-local
+installdirs:
+install: install-am
+install-exec: install-exec-am
+install-data: install-data-am
+uninstall: uninstall-am
+
+install-am: all-am
+ @$(MAKE) $(AM_MAKEFLAGS) install-exec-am install-data-am
+
+installcheck: installcheck-am
+install-strip:
+ if test -z '$(STRIP)'; then \
+ $(MAKE) $(AM_MAKEFLAGS) INSTALL_PROGRAM="$(INSTALL_STRIP_PROGRAM)" \
+ install_sh_PROGRAM="$(INSTALL_STRIP_PROGRAM)" INSTALL_STRIP_FLAG=-s \
+ install; \
+ else \
+ $(MAKE) $(AM_MAKEFLAGS) INSTALL_PROGRAM="$(INSTALL_STRIP_PROGRAM)" \
+ install_sh_PROGRAM="$(INSTALL_STRIP_PROGRAM)" INSTALL_STRIP_FLAG=-s \
+ "INSTALL_PROGRAM_ENV=STRIPPROG='$(STRIP)'" install; \
+ fi
+mostlyclean-generic:
+ -test -z "$(MOSTLYCLEANFILES)" || rm -f $(MOSTLYCLEANFILES)
+ -test -z "$(TEST_LOGS)" || rm -f $(TEST_LOGS)
+ -test -z "$(TEST_LOGS:.log=.trs)" || rm -f $(TEST_LOGS:.log=.trs)
+ -test -z "$(TEST_SUITE_LOG)" || rm -f $(TEST_SUITE_LOG)
+
+clean-generic:
+ -test -z "$(CLEANFILES)" || rm -f $(CLEANFILES)
+
+distclean-generic:
+ -test -z "$(CONFIG_CLEAN_FILES)" || rm -f $(CONFIG_CLEAN_FILES)
+ -test . = "$(srcdir)" || test -z "$(CONFIG_CLEAN_VPATH_FILES)" || rm -f $(CONFIG_CLEAN_VPATH_FILES)
+
+maintainer-clean-generic:
+ @echo "This command is intended for maintainers to use"
+ @echo "it deletes files that may require special tools to rebuild."
+clean: clean-am
+
+clean-am: clean-generic clean-libtool mostlyclean-am
+
+distclean: distclean-am
+ -rm -f Makefile
+distclean-am: clean-am distclean-generic
+
+dvi: dvi-am
+
+dvi-am:
+
+html: html-am
+
+html-am:
+
+info: info-am
+
+info-am:
+
+install-data-am: install-data-local
+
+install-dvi: install-dvi-am
+
+install-dvi-am:
+
+install-exec-am:
+
+install-html: install-html-am
+
+install-html-am:
+
+install-info: install-info-am
+
+install-info-am:
+
+install-man:
+
+install-pdf: install-pdf-am
+
+install-pdf-am:
+
+install-ps: install-ps-am
+
+install-ps-am:
+
+installcheck-am: installcheck-local
+
+maintainer-clean: maintainer-clean-am
+ -rm -f Makefile
+maintainer-clean-am: distclean-am maintainer-clean-generic
+
+mostlyclean: mostlyclean-am
+
+mostlyclean-am: mostlyclean-generic mostlyclean-libtool \
+ mostlyclean-local
+
+pdf: pdf-am
+
+pdf-am:
+
+ps: ps-am
+
+ps-am:
+
+uninstall-am: uninstall-local
+
+.MAKE: check-am install-am install-strip
+
+.PHONY: all all-am all-local check check-TESTS check-am clean \
+ clean-generic clean-libtool cscopelist-am ctags-am distclean \
+ distclean-generic distclean-libtool distdir dvi dvi-am html \
+ html-am info info-am install install-am install-data \
+ install-data-am install-data-local install-dvi install-dvi-am \
+ install-exec install-exec-am install-html install-html-am \
+ install-info install-info-am install-man install-pdf \
+ install-pdf-am install-ps install-ps-am install-strip \
+ installcheck installcheck-am installcheck-local installdirs \
+ maintainer-clean maintainer-clean-generic mostlyclean \
+ mostlyclean-generic mostlyclean-libtool mostlyclean-local pdf \
+ pdf-am ps ps-am recheck tags-am uninstall uninstall-am \
+ uninstall-local
+
+.PRECIOUS: Makefile
+
+
+# List all build rules defined by HDF5 Makefiles as "PHONY" targets here.
+# This tells the Makefiles that these targets are not files to be built but
+# commands that should be executed even if a file with the same name already
+# exists.
+.PHONY: build-check-clean build-check-p build-check-s build-lib build-progs \
+ build-tests check-clean check-install check-p check-s check-vfd \
+ install-doc lib progs tests uninstall-doc _exec_check-s _test help
+
+help:
+ @$(top_srcdir)/bin/makehelp
+
+# How to build programs using h5c++
+$(EXTRA_PROG): $(H5CPP)
+ $(H5CPP) $(H5CCFLAGS) $(CPPFLAGS) -o $@ $(srcdir)/$@.cpp
+
+# List dependencies for each program. Normally, automake would take
+# care of this for us, but if we tell automake about the programs it
+# will try to build them with the normal C++ compiler, not h5c++. This is
+# an inelegant way of solving the problem, unfortunately.
+ptExampleFL: ptExampleFL.cpp
+
+# How to create EXAMPLEDIR if it doesn't already exist
+$(EXAMPLEDIR):
+ -$(top_srcdir)/bin/mkdirs $@
+$(EXAMPLETOPDIR):
+ -$(top_srcdir)/bin/mkdirs $@
+
+# Install and uninstall rules. We install the source files, not the
+# example programs themselves.
+install-data-local:
+ @$(MAKE) $(AM_MAKEFLAGS) install-examples
+uninstall-local:
+ @$(MAKE) $(AM_MAKEFLAGS) uninstall-examples
+
+install-examples: $(EXAMPLEDIR) $(INSTALL_FILES)
+ @for f in X $(INSTALL_FILES); do \
+ if test $$f != X; then \
+ (set -x; $(INSTALL) $(srcdir)/$$f $(EXAMPLEDIR)/. || exit 1); \
+ chmod a-x $(EXAMPLEDIR)/$$f; \
+ fi; \
+ done
+ @for f in X $(INSTALL_SCRIPT_FILES); do \
+ if test $$f != X; then \
+ (set -x; $(INSTALL) $$f $(EXAMPLEDIR)/. || exit 1);\
+ fi; \
+ done
+ @for f in X $(INSTALL_TOP_FILES); do \
+ if test $$f != X; then \
+ (set -x; $(INSTALL) $(srcdir)/$$f $(EXAMPLETOPDIR)/. || exit 1); \
+ chmod a-x $(EXAMPLETOPDIR)/$$f;\
+ fi; \
+ done
+ @for f in X $(INSTALL_TOP_SCRIPT_FILES); do \
+ if test $$f != X; then \
+ (set -x; $(INSTALL) $(srcdir)/$$f $(EXAMPLETOPDIR)/. || exit 1); \
+ fi; \
+ done
+
+uninstall-examples:
+ @if test -n "$(INSTALL_FILES)" -a -d $(EXAMPLEDIR); then \
+ set -x; cd $(EXAMPLEDIR) && $(RM) $(INSTALL_FILES); \
+ fi
+ @if test -n "$(INSTALL_SCRIPT_FILES)" -a -d $(EXAMPLEDIR); then \
+ set -x; cd $(EXAMPLEDIR) && $(RM) $(INSTALL_SCRIPT_FILES); \
+ fi
+ @if test -n "$(INSTALL_TOP_FILES)" -a -d $(EXAMPLETOPDIR); then \
+ set -x; cd $(EXAMPLETOPDIR) && $(RM) $(INSTALL_TOP_FILES); \
+ fi
+ @if test -n "$(INSTALL_TOP_SCRIPT_FILES)" -a -d $(EXAMPLETOPDIR); then \
+ set -x; cd $(EXAMPLETOPDIR) && $(RM) $(INSTALL_TOP_SCRIPT_FILES); \
+ fi
+
+installcheck-local:
+ @if test "$(STATIC_SHARED)" = "static, shared"; then \
+ H5CCFLAGS="-shlib" $(MAKE) $(AM_MAKEFLAGS) check; \
+ $(MAKE) $(AM_MAKEFLAGS) clean; \
+ H5CCFLAGS="" $(MAKE) $(AM_MAKEFLAGS) check; \
+ elif test "$(STATIC_SHARED)" = "shared"; then \
+ H5CCFLAGS="-shlib" $(MAKE) $(AM_MAKEFLAGS) check; \
+ else \
+ $(MAKE) $(AM_MAKEFLAGS) check; \
+ fi
+ @if test "$(INSTALL_FILES)" -a $(TEST_EXAMPLES_SCRIPT) -a -d $(EXAMPLEDIR); then \
+ echo "============================"; \
+ echo "Testing $(TEST_EXAMPLES_SCRIPT)"; \
+ echo "============================"; \
+ (cd $(EXAMPLEDIR); \
+ /bin/sh ./$(TEST_EXAMPLES_SCRIPT);) \
+ fi
+
+# lib/progs/tests targets recurse into subdirectories. build-* targets
+# build files in this directory.
+build-dyn: $(DYN)
+build-lib: $(LIB)
+build-progs: $(LIB) $(PROGS)
+build-tests: $(LIB) $(PROGS) $(chk_TESTS)
+
+# General rule for recursive building targets.
+# BUILT_SOURCES contain targets that need to be built before anything else
+# in the directory (e.g., for Fortran type detection)
+lib dyn progs tests check-s check-p :: $(BUILT_SOURCES)
+ @$(MAKE) $(AM_MAKEFLAGS) build-$@ || exit 1;
+ @for d in X $(SUBDIRS); do \
+ if test $$d != X && test $$d != .; then \
+ (set -x; cd $$d && $(MAKE) $(AM_MAKEFLAGS) $@) || exit 1; \
+ fi; \
+ done
+
+# General rule for recursive cleaning targets. Like the rule above,
+# but doesn't require building BUILT_SOURCES.
+check-clean ::
+ @$(MAKE) $(AM_MAKEFLAGS) build-$@ || exit 1;
+ @for d in X $(SUBDIRS); do \
+ if test $$d != X && test $$d != .; then \
+ (set -x; cd $$d && $(MAKE) $(AM_MAKEFLAGS) $@) || exit 1; \
+ fi; \
+ done
+
+# Tell Automake to build tests when the user types `make all' (this is
+# not its default behavior). Also build EXTRA_LIB and EXTRA_PROG since
+# Automake won't build them automatically, either.
+all-local: $(EXTRA_LIB) $(EXTRA_PROG) $(chk_TESTS)
+
+# make install-doc doesn't do anything outside of doc directory, but
+# Makefiles should recognize it.
+# UPDATE: docs no longer reside in this build tree, so this target
+# is depreciated.
+install-doc uninstall-doc:
+ @echo "Nothing to be done."
+
+# clean up files generated by tests so they can be re-run.
+build-check-clean:
+ $(RM) -rf $(CHECK_CLEANFILES)
+
+# run check-clean whenever mostlyclean is run
+mostlyclean-local: build-check-clean
+
+# check-install is just a synonym for installcheck
+check-install: installcheck
+
+# Run each test in order, passing $(TEST_FLAGS) to the program.
+# Since tests are done in a shell loop, "make -i" does apply inside it.
+# Set HDF5_Make_Ignore to a non-blank string to ignore errors inside the loop.
+# The timestamps give a rough idea how much time the tests use.
+#
+# Note that targets in chk_TESTS (defined above) will be built when the user
+# types 'make tests' or 'make check', but only programs in TEST_PROG,
+# TEST_PROG_PARA, or TEST_SCRIPT will actually be executed.
+check-TESTS: test
+
+test _test:
+ @$(MAKE) build-check-s
+ @$(MAKE) build-check-p
+
+# Actual execution of check-s.
+build-check-s: $(LIB) $(PROGS) $(chk_TESTS)
+ @if test -n "$(TEST_PROG)$(TEST_SCRIPT)"; then \
+ echo "===Serial tests in `echo ${PWD} | sed -e s:.*/::` begin `date`==="; \
+ fi
+ @$(MAKE) $(AM_MAKEFLAGS) _exec_check-s
+ @if test -n "$(TEST_PROG)$(TEST_SCRIPT)"; then \
+ echo "===Serial tests in `echo ${PWD} | sed -e s:.*/::` ended `date`===";\
+ fi
+
+_exec_check-s: $(TEST_PROG_CHKEXE) $(TEST_SCRIPT_CHKSH)
+
+# The dummy.chkexe here prevents the target from being
+# empty if there are no tests in the current directory.
+# $${log} is the log file.
+# $${tname} is the name of test.
+$(TEST_PROG_CHKEXE) $(TEST_PROG_PARA_CHKEXE) dummy.chkexe_:
+ @if test "X$@" != "X.chkexe_" && test "X$@" != "Xdummy.chkexe_"; then \
+ tname=$(@:.chkexe_=)$(EXEEXT);\
+ log=$(@:.chkexe_=.chklog); \
+ echo "============================"; \
+ if $(top_srcdir)/bin/newer $(@:.chkexe_=.chkexe) $${tname}; then \
+ echo "No need to test $${tname} again."; \
+ else \
+ echo "============================" > $${log}; \
+ if test "X$(FORTRAN_API)" = "Xyes"; then \
+ echo "Fortran API: Testing $(HDF5_DRIVER) $${tname} $(TEST_FLAGS)"; \
+ echo "Fortran API: $(HDF5_DRIVER) $${tname} $(TEST_FLAGS) Test Log" >> $${log}; \
+ elif test "X$(CXX_API)" = "Xyes"; then \
+ echo "C++ API: Testing $(HDF5_DRIVER) $${tname} $(TEST_FLAGS)"; \
+ echo "C++ API: $(HDF5_DRIVER) $${tname} $(TEST_FLAGS) Test Log" >> $${log};\
+ else \
+ echo "Testing $(HDF5_DRIVER) $${tname} $(TEST_FLAGS)"; \
+ echo "$(HDF5_DRIVER) $${tname} $(TEST_FLAGS) Test Log" >> $${log}; \
+ fi; \
+ echo "============================" >> $${log}; \
+ srcdir="$(srcdir)" \
+ $(TIME) $(RUNEXEC) ./$${tname} $(TEST_FLAGS) >> $${log} 2>&1 \
+ && touch $(@:.chkexe_=.chkexe) || \
+ (test $$HDF5_Make_Ignore && echo "*** Error ignored") || \
+ (cat $${log} && false) || exit 1; \
+ echo "" >> $${log}; \
+ echo "Finished testing $${tname} $(TEST_FLAGS)" >> $${log}; \
+ echo "============================" >> $${log}; \
+ echo "Finished testing $${tname} $(TEST_FLAGS)"; \
+ cat $${log}; \
+ fi; \
+ fi
+
+# The dummysh.chkexe here prevents the target from being
+# empty if there are no tests in the current directory.
+# $${log} is the log file.
+# $${tname} is the name of test.
+$(TEST_SCRIPT_CHKSH) $(TEST_SCRIPT_PARA_CHKSH) dummysh.chkexe_:
+ @if test "X$@" != "X.chkexe_" && test "X$@" != "Xdummysh.chkexe_"; then \
+ cmd=$(@:.chkexe_=);\
+ tname=`basename $$cmd`;\
+ chkname=`basename $(@:.chkexe_=.chkexe)`;\
+ log=`basename $(@:.chkexe_=.chklog)`; \
+ echo "============================"; \
+ if $(top_srcdir)/bin/newer $${chkname} $$cmd $(SCRIPT_DEPEND); then \
+ echo "No need to test $${tname} again."; \
+ else \
+ echo "============================" > $${log}; \
+ if test "X$(FORTRAN_API)" = "Xyes"; then \
+ echo "Fortran API: Testing $${tname} $(TEST_FLAGS)"; \
+ echo "Fortran API: $${tname} $(TEST_FLAGS) Test Log" >> $${log}; \
+ elif test "X$(CXX_API)" = "Xyes"; then \
+ echo "C++ API: Testing $${tname} $(TEST_FLAGS)"; \
+ echo "C++ API: $${tname} $(TEST_FLAGS) Test Log" >> $${log}; \
+ else \
+ echo "Testing $${tname} $(TEST_FLAGS)"; \
+ echo "$${tname} $(TEST_FLAGS) Test Log" >> $${log}; \
+ fi; \
+ echo "============================" >> $${log}; \
+ RUNSERIAL="$(RUNSERIAL)" RUNPARALLEL="$(RUNPARALLEL)" \
+ srcdir="$(srcdir)" \
+ $(TIME) $(SHELL) $$cmd $(TEST_FLAGS) >> $${log} 2>&1 \
+ && touch $${chkname} || \
+ (test $$HDF5_Make_Ignore && echo "*** Error ignored") || \
+ (cat $${log} && false) || exit 1; \
+ echo "" >> $${log}; \
+ echo "Finished testing $${tname} $(TEST_FLAGS)" >> $${log}; \
+ echo "============================" >> $${log}; \
+ echo "Finished testing $${tname} $(TEST_FLAGS)"; \
+ cat $${log}; \
+ fi; \
+ echo "============================"; \
+ fi
+
+# Actual execution of check-p.
+build-check-p: $(LIB) $(PROGS) $(chk_TESTS)
+ @if test -n "$(TEST_PROG_PARA)$(TEST_SCRIPT_PARA)"; then \
+ echo "===Parallel tests in `echo ${PWD} | sed -e s:.*/::` begin `date`==="; \
+ fi
+ @if test -n "$(TEST_PROG_PARA)"; then \
+ echo "**** Hint ****"; \
+ echo "Parallel test files reside in the current directory" \
+ "by default."; \
+ echo "Set HDF5_PARAPREFIX to use another directory. E.g.,"; \
+ echo " HDF5_PARAPREFIX=/PFS/user/me"; \
+ echo " export HDF5_PARAPREFIX"; \
+ echo " make check"; \
+ echo "**** end of Hint ****"; \
+ fi
+ @for test in $(TEST_PROG_PARA) dummy; do \
+ if test $$test != dummy; then \
+ $(MAKE) $(AM_MAKEFLAGS) $$test.chkexe_ \
+ RUNEXEC="$(RUNPARALLEL)" || exit 1; \
+ fi; \
+ done
+ @for test in $(TEST_SCRIPT_PARA) dummy; do \
+ if test $$test != dummy; then \
+ $(MAKE) $(AM_MAKEFLAGS) $$test.chkexe_ || exit 1; \
+ fi; \
+ done
+ @if test -n "$(TEST_PROG_PARA)$(TEST_SCRIPT_PARA)"; then \
+ echo "===Parallel tests in `echo ${PWD} | sed -e s:.*/::` ended `date`===";\
+ fi
+
+# Run test with different Virtual File Driver
+check-vfd: $(LIB) $(PROGS) $(chk_TESTS)
+ @for vfd in $(VFD_LIST) dummy; do \
+ if test $$vfd != dummy; then \
+ echo "============================"; \
+ echo "Testing Virtual File Driver $$vfd"; \
+ echo "============================"; \
+ $(MAKE) $(AM_MAKEFLAGS) check-clean || exit 1; \
+ HDF5_DRIVER=$$vfd $(MAKE) $(AM_MAKEFLAGS) check || exit 1; \
+ fi; \
+ done
+
+# Tell versions [3.59,3.63) of GNU make to not export all variables.
+# Otherwise a system limit (for SysV at least) may be exceeded.
+.NOEXPORT:
diff --git a/hl/c++/examples/ptExampleFL.cpp b/hl/c++/examples/ptExampleFL.cpp
new file mode 100644
index 0000000..26cbf09
--- /dev/null
+++ b/hl/c++/examples/ptExampleFL.cpp
@@ -0,0 +1,101 @@
+/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
+ * Copyright by The HDF Group. *
+ * Copyright by the Board of Trustees of the University of Illinois. *
+ * All rights reserved. *
+ * *
+ * This file is part of HDF5. The full HDF5 copyright notice, including *
+ * terms governing use, modification, and redistribution, is contained in *
+ * the COPYING file, which can be found at the root of the source code *
+ * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. *
+ * If you do not have access to either file, you may request a copy from *
+ * help@hdfgroup.org. *
+ * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
+
+#include "H5PacketTable.h"
+
+/*-------------------------------------------------------------------------
+ * Packet Table Fixed-Length Example
+ *
+ * Example program that creates a packet table and performs
+ * writes and reads.
+ *
+ *-------------------------------------------------------------------------
+ */
+
+const char* FILE_NAME("PTcppexampleFL.h5");
+const char* PT_NAME("/examplePacketTable");
+
+int main(void)
+{
+ herr_t err; /* Return value from function calls */
+ hid_t fileID; /* HDF5 identifier for file */
+ hid_t plistID; /* HDF5 identifier for property list to use compression */
+ hsize_t count; /* Number of records in table */
+ int x; /* Temporary counter variable */
+
+ /* Buffers to hold data */
+ int readBuffer[5];
+ int writeBuffer[5];
+
+ /* Initialize buffers */
+ for(x=0; x<5; x++)
+ {
+ writeBuffer[x]=x;
+ readBuffer[x] = -1;
+ }
+
+ /* Create a new HDF5 file */
+ fileID = H5Fcreate(FILE_NAME, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
+ if(fileID <0)
+ fprintf(stderr, "Couldn't create file.\n");
+
+ /* Prepare property list to set compression, randomly use deflate
+ with compression level 5. */
+ plistID = H5Pcreate(H5P_DATASET_CREATE);
+ err = H5Pset_deflate(plistID, 5);
+ if(err < 0)
+ fprintf(stderr, "Error setting compression level.");
+
+ /* Create a fixed-length packet table. */
+ FL_PacketTable ptable(fileID, plistID, PT_NAME, H5T_NATIVE_INT, 100);
+ if(! ptable.IsValid())
+ fprintf(stderr, "Unable to create packet table.");
+
+ /* Append five packets to the packet table, one at a time */
+ for(x=0; x<5; x++)
+ {
+ err = ptable.AppendPacket( &(writeBuffer[x]) );
+ if(err<0)
+ fprintf(stderr, "Error adding record.");
+ }
+
+ /* Get the number of packets in the packet table. This should be five. */
+ count = ptable.GetPacketCount(err);
+ if(err < 0)
+ fprintf(stderr, "Error getting packet count.");
+
+ printf("Number of packets in packet table after five appends: %d\n", count);
+
+ /* Initialize packet table's "current record" */
+ ptable.ResetIndex();
+
+ /* Iterate through packets, read each one back */
+ for(x=0; x<5; x++)
+ {
+ err = ptable.GetNextPacket( &(readBuffer[x]) );
+ if(err < 0)
+ fprintf(stderr, "Error reading record.");
+
+ printf("Packet %d's value is %d.\n", x, readBuffer[x]);
+ }
+
+ /* The packet table will close automatically when its object goes */
+ /* out of scope. */
+
+ err = H5Fclose(fileID);
+ if( err < 0 )
+ fprintf(stderr, "Failed to close file.\n");
+
+ return 0;
+}
+
diff --git a/hl/c++/examples/run-hlc++-ex.sh.in b/hl/c++/examples/run-hlc++-ex.sh.in
new file mode 100644
index 0000000..9539724
--- /dev/null
+++ b/hl/c++/examples/run-hlc++-ex.sh.in
@@ -0,0 +1,78 @@
+#! /bin/sh
+#
+# Copyright by The HDF Group.
+# All rights reserved.
+#
+# This file is part of HDF5. The full HDF5 copyright notice, including
+# terms governing use, modification, and redistribution, is contained in
+# the COPYING file, which can be found at the root of the source code
+# distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases.
+# If you do not have access to either file, you may request a copy from
+# help@hdfgroup.org.
+
+#
+# This file: run-hlc++-ex.sh
+# Written by: Larry Knox
+# Date: May 11, 2010
+#
+# # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # #
+# #
+# This script will compile and run the c++ examples from source files #
+# installed in .../share/hdf5_examples/hl/c++ using h5c++. The #
+# order for running programs with RunTest in the MAIN section below is taken #
+# from the Makefile. The order is important since some of the test programs #
+# use data files created by earlier test programs. Any future additions should #
+# be placed accordingly. #
+# #
+# # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # #
+
+# Initializations
+EXIT_SUCCESS=0
+EXIT_FAILURE=1
+# Where the tool is installed.
+# default is relative path to installed location of the tools
+prefix="${prefix:-@prefix@}"
+AR="@AR@"
+RANLIB="@RANLIB@"
+H5TOOL="h5c++" # The tool name
+H5TOOL_BIN="${prefix}/bin/${H5TOOL}" # The path of the tool binary
+
+#### Run test ####
+RunTest()
+{
+ TEST_EXEC=$1
+ Test=$1".cpp"
+
+ echo
+ echo "################# $1 #################"
+ ${H5TOOL_BIN} -o $TEST_EXEC $Test
+ if [ $? -ne 0 ]
+ then
+ echo "messed up compiling $Test"
+ exit 1
+ fi
+ ./$TEST_EXEC
+}
+
+
+
+################## MAIN ##################
+
+# Run tests
+if [ $? -eq 0 ]
+then
+ if (RunTest ptExampleFL &&\
+ rm ptExampleFL); then
+ EXIT_VALUE=${EXIT_SUCCESS}
+ else
+ EXIT_VALUE=${EXIT_FAILURE}
+ fi
+fi
+
+# Cleanup
+rm *.o
+rm *.h5
+echo
+
+exit $EXIT_VALUE
+
diff --git a/hl/c++/src/CMakeLists.txt b/hl/c++/src/CMakeLists.txt
new file mode 100644
index 0000000..38604cd
--- /dev/null
+++ b/hl/c++/src/CMakeLists.txt
@@ -0,0 +1,79 @@
+cmake_minimum_required (VERSION 3.2.2)
+PROJECT (HDF5_HL_CPP_SRC)
+
+#-----------------------------------------------------------------------------
+# Define Sources
+#-----------------------------------------------------------------------------
+INCLUDE_DIRECTORIES (${HDF5_HL_SRC_DIR}/src)
+INCLUDE_DIRECTORIES (${HDF5_HL_CPP_SRC_SOURCE_DIR})
+
+set (HDF5_HL_CPP_SOURCES ${HDF5_HL_CPP_SRC_SOURCE_DIR}/H5PacketTable.cpp)
+set (HDF5_HL_CPP_HDRS ${HDF5_HL_CPP_SRC_SOURCE_DIR}/H5PacketTable.h)
+
+add_library (${HDF5_HL_CPP_LIB_TARGET} STATIC ${HDF5_HL_CPP_SOURCES})
+TARGET_C_PROPERTIES (${HDF5_HL_CPP_LIB_TARGET} STATIC " " " ")
+target_link_libraries (
+ ${HDF5_HL_CPP_LIB_TARGET}
+ ${HDF5_HL_LIB_TARGET}
+ ${HDF5_LIB_TARGET}
+)
+set_global_variable (HDF5_LIBRARIES_TO_EXPORT "${HDF5_LIBRARIES_TO_EXPORT};${HDF5_HL_CPP_LIB_TARGET}")
+H5_SET_LIB_OPTIONS (${HDF5_HL_CPP_LIB_TARGET} ${HDF5_HL_CPP_LIB_NAME} STATIC)
+set_target_properties (${HDF5_HL_CPP_LIB_TARGET} PROPERTIES
+ FOLDER libraries/hl
+ INTERFACE_INCLUDE_DIRECTORIES "$<INSTALL_INTERFACE:$<INSTALL_PREFIX>/include>"
+)
+set (install_targets ${HDF5_HL_CPP_LIB_TARGET})
+
+if (BUILD_SHARED_LIBS)
+ add_library (${HDF5_HL_CPP_LIBSH_TARGET} SHARED ${HDF5_HL_CPP_SOURCES})
+ TARGET_C_PROPERTIES (${HDF5_HL_CPP_LIBSH_TARGET} SHARED " " " ")
+ target_link_libraries (
+ ${HDF5_HL_CPP_LIBSH_TARGET}
+ ${HDF5_HL_LIBSH_TARGET}
+ ${HDF5_LIBSH_TARGET}
+ )
+ set_global_variable (HDF5_LIBRARIES_TO_EXPORT "${HDF5_LIBRARIES_TO_EXPORT};${HDF5_HL_CPP_LIBSH_TARGET}")
+ H5_SET_LIB_OPTIONS (${HDF5_HL_CPP_LIBSH_TARGET} ${HDF5_HL_CPP_LIB_NAME} SHARED ${HDF5_HL_CXX_PACKAGE_SOVERSION})
+ set_target_properties (${HDF5_HL_CPP_LIBSH_TARGET} PROPERTIES
+ FOLDER libraries/hl
+ COMPILE_DEFINITIONS "H5_BUILT_AS_DYNAMIC_LIB"
+ INTERFACE_INCLUDE_DIRECTORIES "$<INSTALL_INTERFACE:$<INSTALL_PREFIX>/include>"
+ INTERFACE_COMPILE_DEFINITIONS H5_BUILT_AS_DYNAMIC_LIB=1
+ )
+ set (install_targets ${install_targets} ${HDF5_HL_CPP_LIBSH_TARGET})
+endif ()
+
+#-----------------------------------------------------------------------------
+# Add file(s) to CMake Install
+#-----------------------------------------------------------------------------
+install (
+ FILES
+ ${HDF5_HL_CPP_HDRS}
+ DESTINATION
+ ${HDF5_INSTALL_INCLUDE_DIR}
+ COMPONENT
+ hlcppheaders
+)
+
+#-----------------------------------------------------------------------------
+# Add Target(s) to CMake Install for import into other projects
+#-----------------------------------------------------------------------------
+if (HDF5_EXPORTED_TARGETS)
+ if (BUILD_SHARED_LIBS)
+ INSTALL_TARGET_PDB (${HDF5_HL_CPP_LIBSH_TARGET} ${HDF5_INSTALL_BIN_DIR} hlcpplibraries)
+ endif ()
+ INSTALL_TARGET_PDB (${HDF5_HL_CPP_LIB_TARGET} ${HDF5_INSTALL_BIN_DIR} hlcpplibraries)
+
+ install (
+ TARGETS
+ ${install_targets}
+ EXPORT
+ ${HDF5_EXPORTED_TARGETS}
+ LIBRARY DESTINATION ${HDF5_INSTALL_LIB_DIR} COMPONENT hlcpplibraries
+ ARCHIVE DESTINATION ${HDF5_INSTALL_LIB_DIR} COMPONENT hlcpplibraries
+ RUNTIME DESTINATION ${HDF5_INSTALL_BIN_DIR} COMPONENT hlcpplibraries
+ FRAMEWORK DESTINATION ${HDF5_INSTALL_FWRK_DIR} COMPONENT hlcpplibraries
+ INCLUDES DESTINATION include
+ )
+endif ()
diff --git a/hl/c++/src/H5PacketTable.cpp b/hl/c++/src/H5PacketTable.cpp
new file mode 100644
index 0000000..544df0b
--- /dev/null
+++ b/hl/c++/src/H5PacketTable.cpp
@@ -0,0 +1,280 @@
+/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
+ * Copyright by The HDF Group. *
+ * Copyright by the Board of Trustees of the University of Illinois. *
+ * All rights reserved. *
+ * *
+ * This file is part of HDF5. The full HDF5 copyright notice, including *
+ * terms governing use, modification, and redistribution, is contained in *
+ * the COPYING file, which can be found at the root of the source code *
+ * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. *
+ * If you do not have access to either file, you may request a copy from *
+ * help@hdfgroup.org. *
+ * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
+
+/* Packet Table wrapper classes
+ *
+ * Wraps the H5PT Packet Table C functions in C++ objects
+ *
+ * Nat Furrer and James Laird
+ * February 2004
+ */
+
+/* High-level library internal header file */
+#include "H5HLprivate2.h"
+
+#include "H5PacketTable.h"
+
+ /********************************/
+ /* PacketTable superclass */
+ /********************************/
+
+ /* "Open" Constructor
+ * Opens an existing packet table, which can contain either fixed-length or
+ * variable-length packets.
+ */
+ PacketTable::PacketTable(hid_t fileID, const char* name)
+ {
+ table_id = H5PTopen( fileID, name);
+ }
+
+ /* "Open" Constructor - will be deprecated because of char* name */
+ PacketTable::PacketTable(hid_t fileID, char* name)
+ {
+ table_id = H5PTopen( fileID, name);
+ }
+
+ /* Destructor
+ * Cleans up the packet table
+ */
+ PacketTable::~PacketTable()
+ {
+ H5PTclose( table_id);
+ }
+
+ /* IsValid
+ * Returns true if this packet table is valid, false otherwise.
+ * Use this after the constructor to ensure HDF did not have
+ * any trouble making or opening the packet table.
+ */
+ bool PacketTable::IsValid()
+ {
+ if (H5PTis_valid(table_id) == 0)
+ return true;
+ else
+ return false;
+ }
+
+ /* IsVariableLength
+ * Return 1 if this packet table uses variable-length datatype,
+ * and 0, otherwise. Returns -1 if the table is invalid (not open).
+ */
+ int PacketTable::IsVariableLength()
+ {
+ return H5PTis_varlen(table_id);
+ }
+
+ /* ResetIndex
+ * Sets the index to point to the first packet in the packet table
+ */
+ void PacketTable::ResetIndex()
+ {
+ H5PTcreate_index(table_id);
+ }
+
+ /* SetIndex
+ * Sets the index to point to the packet specified by index.
+ * Returns 0 on success, negative on failure (if index is out of bounds)
+ */
+ int PacketTable::SetIndex(hsize_t index)
+ {
+ return H5PTset_index(table_id, index);
+ }
+
+ /* SetIndex
+ * Sets the index to point to the packet specified by index.
+ * Returns 0 on success, negative on failure (if index is out of bounds)
+ */
+ hsize_t PacketTable::GetIndex(int &error)
+ {
+ hsize_t index;
+
+ error = H5PTget_index(table_id, &index);
+ if(error < 0)
+ return 0;
+ else
+ return index;
+ }
+
+ /* GetPacketCount
+ * Returns the number of packets in the packet table. Error
+ * is set to 0 on success. On failure, returns 0 and
+ * error is set to negative.
+ */
+ hsize_t PacketTable::GetPacketCount(int& error)
+ {
+ hsize_t npackets;
+
+ error = H5PTget_num_packets(table_id, &npackets);
+ return npackets;
+ }
+
+ /* GetTableId
+ * Returns the identifier of the packet table
+ */
+ hid_t PacketTable::GetTableId()
+ {
+ return table_id;
+ }
+
+ /* GetDatatype
+ * Returns the datatype identifier used by the packet table, on success,
+ * or H5I_INVALID_HID, on failure.
+ * Note: it is best to avoid using this identifier in applications, unless
+ * the desired functionality cannot be performed via the packet table ID.
+ */
+ hid_t PacketTable::GetDatatype()
+ {
+ return H5PTget_type(table_id);
+ }
+
+ /* GetDataset
+ * Returns the dataset identifier associated with the packet table, on
+ * success, or H5I_INVALID_HID, on failure.
+ * Note: it is best to avoid using this identifier in applications, unless
+ * the desired functionality cannot be performed via the packet table ID.
+ */
+ hid_t PacketTable::GetDataset()
+ {
+ return H5PTget_dataset(table_id);
+ }
+
+ /* FreeBuff
+ * Frees the buffers created when variable-length packets are read.
+ * Takes the number of hvl_t structs to be freed and a pointer to their
+ * location in memory.
+ * Returns 0 on success, negative on error.
+ */
+ int PacketTable::FreeBuff(size_t numStructs, hvl_t * buffer)
+ {
+ return H5PTfree_vlen_buff( table_id, numStructs, buffer);
+ }
+
+
+ /********************************/
+ /* Fixed-Length Packet Table */
+ /********************************/
+
+ /* Constructor
+ * Creates a packet table to store either fixed- or variable-length packets.
+ * Takes the ID of the file the packet table will be created in, the ID of
+ * the property list to specify compression, the name of the packet table,
+ * the ID of the datatype, and the size of a memory chunk used in chunking.
+ */
+ FL_PacketTable::FL_PacketTable(hid_t fileID, const char* name, hid_t dtypeID, hsize_t chunkSize, hid_t plistID)
+ {
+ table_id = H5PTcreate(fileID, name, dtypeID, chunkSize, plistID);
+ }
+
+ /* Constructor - deprecated
+ * Creates a packet table to store either fixed- or variable-length packets.
+ * Takes the ID of the file the packet table will be created in, the ID of
+ * the property list to specify compression, the name of the packet table,
+ * the ID of the datatype, and the size of a memory chunk used in chunking.
+ * Note: The above constructor has a better prototype, which allows default
+ * values to be used. This constructor was only released in 1.10.0.
+ */
+ FL_PacketTable::FL_PacketTable(hid_t fileID, hid_t plistID, const char* name, hid_t dtypeID, hsize_t chunkSize)
+ {
+ table_id = H5PTcreate(fileID, name, dtypeID, chunkSize, plistID);
+ }
+
+ /* Constructor
+ * Creates a packet table to store either fixed- or variable-length packets.
+ * Takes the ID of the file the packet table will be created in, the name of
+ * the packet table, the ID of the datatype of the set, and the size
+ * of a memory chunk used in chunking.
+ * Note: this overload will be deprecated in favor of the constructor above.
+ */
+ FL_PacketTable::FL_PacketTable(hid_t fileID, char* name, hid_t dtypeID, hsize_t chunkSize, int compression)
+ {
+ table_id = H5PTcreate_fl(fileID, name, dtypeID, chunkSize, compression);
+ }
+
+ /* "Open" Constructor
+ * Opens an existing fixed-length packet table.
+ * Fails if the packet table specified is variable-length.
+ */
+ FL_PacketTable::FL_PacketTable(hid_t fileID, const char* name) : PacketTable(fileID, name) {}
+
+ /* "Open" Constructor - will be deprecated because of char* name */
+ FL_PacketTable::FL_PacketTable(hid_t fileID, char* name) : PacketTable(fileID, name) {}
+
+ /* AppendPacket
+ * Adds a single packet to the packet table. Takes a pointer
+ * to the location of the data in memory.
+ * Returns 0 on success, negative on failure
+ */
+ int FL_PacketTable::AppendPacket(void * data)
+ {
+ return H5PTappend(table_id, 1, data);
+ }
+
+ /* AppendPackets (multiple packets)
+ * Adds multiple packets to the packet table. Takes the number of packets
+ * to be added and a pointer to their location in memory.
+ * Returns 0 on success, -1 on failure.
+ */
+ int FL_PacketTable::AppendPackets(size_t numPackets, void * data)
+ {
+ return H5PTappend(table_id, numPackets, data);
+ }
+
+ /* GetPacket (indexed)
+ * Gets a single packet from the packet table. Takes the index
+ * of the packet (with 0 being the first packet) and a pointer
+ * to memory where the data should be stored.
+ * Returns 0 on success, negative on failure
+ */
+ int FL_PacketTable::GetPacket(hsize_t index, void * data)
+ {
+ return H5PTread_packets(table_id, index, 1, data);
+ }
+
+ /* GetPackets (multiple packets)
+ * Gets multiple packets at once, all packets between
+ * startIndex and endIndex inclusive. Also takes a pointer to
+ * the memory where these packets should be stored.
+ * Returns 0 on success, negative on failure.
+ */
+ int FL_PacketTable::GetPackets(hsize_t startIndex, hsize_t endIndex, void * data)
+ {
+ // Make sure the range of indexes is valid
+ if (startIndex > endIndex)
+ return -1;
+
+ return H5PTread_packets(table_id, startIndex, (size_t)(endIndex-startIndex+1), data);
+ }
+
+ /* GetNextPacket (single packet)
+ * Gets the next packet in the packet table. Takes a pointer to
+ * memory where the packet should be stored.
+ * Returns 0 on success, negative on failure. Index
+ * is not advanced to the next packet on failure.
+ */
+ int FL_PacketTable::GetNextPacket(void * data)
+ {
+ return H5PTget_next(table_id, 1, data);
+ }
+
+ /* GetNextPackets (multiple packets)
+ * Gets the next numPackets packets in the packet table. Takes a
+ * pointer to memory where these packets should be stored.
+ * Returns 0 on success, negative on failure. Index
+ * is not advanced on failure.
+ */
+ int FL_PacketTable::GetNextPackets(size_t numPackets, void * data)
+ {
+ return H5PTget_next(table_id, numPackets, data);
+ }
+
+/* Removed "ifdef VLPT_REMOVED" block. 03/08/2016, -BMR */
diff --git a/hl/c++/src/H5PacketTable.h b/hl/c++/src/H5PacketTable.h
new file mode 100644
index 0000000..2665984
--- /dev/null
+++ b/hl/c++/src/H5PacketTable.h
@@ -0,0 +1,217 @@
+/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
+ * Copyright by The HDF Group. *
+ * Copyright by the Board of Trustees of the University of Illinois. *
+ * All rights reserved. *
+ * *
+ * This file is part of HDF5. The full HDF5 copyright notice, including *
+ * terms governing use, modification, and redistribution, is contained in *
+ * the COPYING file, which can be found at the root of the source code *
+ * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. *
+ * If you do not have access to either file, you may request a copy from *
+ * help@hdfgroup.org. *
+ * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
+
+/* Packet Table wrapper classes
+ *
+ * Wraps the H5PT Packet Table C functions in C++ objects
+ *
+ * Nat Furrer and James Laird
+ * February 2004
+ */
+
+#ifndef H5PTWRAP_H
+#define H5PTWRAP_H
+
+/* Public HDF5 header */
+#include "hdf5.h"
+
+#include "H5PTpublic.h"
+#include "H5api_adpt.h"
+
+class H5_HLCPPDLL PacketTable
+{
+public:
+ /* Null constructor
+ * Sets table_id to "invalid"
+ */
+ PacketTable() {table_id = H5I_BADID;}
+
+ /* "Open" Constructor
+ * Opens an existing packet table, which can contain either fixed-length or
+ * variable-length packets.
+ */
+ PacketTable(hid_t fileID, const char* name);
+
+ /* "Open" Constructor - will be deprecated because of char* name */
+ PacketTable(hid_t fileID, char* name);
+
+ /* Destructor
+ * Cleans up the packet table
+ */
+ virtual ~PacketTable();
+
+ /* IsValid
+ * Returns true if this packet table is valid, false otherwise.
+ * Use this after the constructor to ensure HDF did not have
+ * any trouble making or opening the packet table.
+ */
+ bool IsValid();
+
+ /* IsVariableLength
+ * Return 1 if this packet table uses variable-length datatype,
+ * return 0 if it is Fixed Length. Returns -1 if the table is
+ * invalid (not open).
+ */
+ int IsVariableLength();
+
+ /* ResetIndex
+ * Sets the "current packet" index to point to the first packet in the
+ * packet table
+ */
+ void ResetIndex();
+
+ /* SetIndex
+ * Sets the current packet to point to the packet specified by index.
+ * Returns 0 on success, negative on failure (if index is out of bounds)
+ */
+ int SetIndex(hsize_t index);
+
+ /* GetIndex
+ * Returns the position of the current packet.
+ * On failure, returns 0 and error is set to negative.
+ */
+ hsize_t GetIndex(int& error);
+
+ /* GetPacketCount
+ * Returns the number of packets in the packet table. Error
+ * is set to 0 on success. On failure, returns 0 and
+ * error is set to negative.
+ */
+ hsize_t GetPacketCount(int& error);
+
+ hsize_t GetPacketCount()
+ {
+ int ignoreError;
+ return GetPacketCount(ignoreError);
+ }
+
+ /* GetTableId
+ * Returns the identifier of the packet table.
+ */
+ hid_t GetTableId();
+
+ /* GetDatatype
+ * Returns the datatype identifier used by the packet table, on success,
+ * or FAIL, on failure.
+ * Note: it is best to avoid using this identifier in applications, unless
+ * the desired functionality cannot be performed via the packet table ID.
+ */
+ hid_t GetDatatype();
+
+ /* GetDataset
+ * Returns the dataset identifier associated with the packet table, on
+ * success, or FAIL, on failure.
+ * Note: it is best to avoid using this identifier in applications, unless
+ * the desired functionality cannot be performed via the packet table ID.
+ */
+ hid_t GetDataset();
+
+ /* FreeBuff
+ * Frees the buffers created when variable-length packets are read.
+ * Takes the number of hvl_t structs to be freed and a pointer to their
+ * location in memory.
+ * Returns 0 on success, negative on error.
+ */
+ int FreeBuff(size_t numStructs, hvl_t * buffer);
+
+protected:
+ hid_t table_id;
+};
+
+class H5_HLCPPDLL FL_PacketTable : virtual public PacketTable
+{
+public:
+ /* Constructor
+ * Creates a packet table to store either fixed- or variable-length packets.
+ * Takes the ID of the file the packet table will be created in, the ID of
+ * the property list to specify compression, the name of the packet table,
+ * the ID of the datatype, and the size of a memory chunk used in chunking.
+ */
+ FL_PacketTable(hid_t fileID, const char* name, hid_t dtypeID, hsize_t chunkSize = 0, hid_t plistID = H5P_DEFAULT);
+
+ /* Constructors - deprecated
+ * Creates a packet table in which to store fixed length packets.
+ * Takes the ID of the file the packet table will be created in, the name of
+ * the packet table, the ID of the datatype of the set, the size
+ * of a memory chunk used in chunking, and the desired compression level
+ * (0-9, or -1 for no compression).
+ * Note: these overloaded constructors will be deprecated in favor of the
+ * constructor above.
+ */
+ FL_PacketTable(hid_t fileID, hid_t plist_id, const char* name, hid_t dtypeID, hsize_t chunkSize);
+ FL_PacketTable(hid_t fileID, char* name, hid_t dtypeID, hsize_t chunkSize, int compression = 0);
+
+ /* "Open" Constructor
+ * Opens an existing fixed-length packet table.
+ * Fails if the packet table specified is variable-length.
+ */
+ FL_PacketTable(hid_t fileID, const char* name);
+
+ /* "Open" Constructor - will be deprecated because of char* name */
+ FL_PacketTable(hid_t fileID, char* name);
+
+ /* Destructor
+ * Cleans up the packet table
+ */
+ virtual ~FL_PacketTable() {};
+
+ /* AppendPacket
+ * Adds a single packet to the packet table. Takes a pointer
+ * to the location of the data in memory.
+ * Returns 0 on success, negative on failure
+ */
+ int AppendPacket(void * data);
+
+ /* AppendPackets (multiple packets)
+ * Adds multiple packets to the packet table. Takes the number of packets
+ * to be added and a pointer to their location in memory.
+ * Returns 0 on success, -1 on failure.
+ */
+ int AppendPackets(size_t numPackets, void * data);
+
+ /* GetPacket (indexed)
+ * Gets a single packet from the packet table. Takes the index
+ * of the packet (with 0 being the first packet) and a pointer
+ * to memory where the data should be stored.
+ * Returns 0 on success, negative on failure
+ */
+ int GetPacket(hsize_t index, void * data);
+
+ /* GetPackets (multiple packets)
+ * Gets multiple packets at once, all packets between
+ * startIndex and endIndex inclusive. Also takes a pointer to
+ * the memory where these packets should be stored.
+ * Returns 0 on success, negative on failure.
+ */
+ int GetPackets(hsize_t startIndex, hsize_t endIndex, void * data);
+
+ /* GetNextPacket (single packet)
+ * Gets the next packet in the packet table. Takes a pointer to
+ * memory where the packet should be stored.
+ * Returns 0 on success, negative on failure. Index
+ * is not advanced to the next packet on failure.
+ */
+ int GetNextPacket(void * data);
+
+ /* GetNextPackets (multiple packets)
+ * Gets the next numPackets packets in the packet table. Takes a
+ * pointer to memory where these packets should be stored.
+ * Returns 0 on success, negative on failure. Index
+ * is not advanced on failure.
+ */
+ int GetNextPackets(size_t numPackets, void * data);
+};
+
+/* Removed "#ifdef VLPT_REMOVED" block. 03/08/2016, -BMR */
+
+#endif /* H5PTWRAP_H */
diff --git a/hl/c++/src/Makefile.am b/hl/c++/src/Makefile.am
new file mode 100644
index 0000000..363ba3b
--- /dev/null
+++ b/hl/c++/src/Makefile.am
@@ -0,0 +1,41 @@
+#
+# Copyright by The HDF Group.
+# Copyright by the Board of Trustees of the University of Illinois.
+# All rights reserved.
+#
+# This file is part of HDF5. The full HDF5 copyright notice, including
+# terms governing use, modification, and redistribution, is contained in
+# the COPYING file, which can be found at the root of the source code
+# distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases.
+# If you do not have access to either file, you may request a copy from
+# help@hdfgroup.org.
+##
+## Makefile.am
+## Run automake to generate a Makefile.in from this file.
+#
+# HDF5-C++ Makefile(.in)
+#
+
+include $(top_srcdir)/config/commence.am
+include $(top_srcdir)/config/lt_vers.am
+
+# Include src directory
+AM_CPPFLAGS+=-I$(top_srcdir)/src -I$(top_srcdir)/hl/src
+
+# This is our main target
+lib_LTLIBRARIES=libhdf5_hl_cpp.la
+
+# Add libtool numbers to the HDF5 HL C++ library (from config/lt_vers.am)
+libhdf5_hl_cpp_la_LDFLAGS= -version-info $(LT_HL_CXX_VERS_INTERFACE):$(LT_HL_CXX_VERS_REVISION):$(LT_HL_CXX_VERS_AGE) $(AM_LDFLAGS)
+
+# Source files for the library
+# At the moment, only the H5PT Packet Table has a C++ API.
+libhdf5_hl_cpp_la_SOURCES=H5PacketTable.cpp
+
+# HDF5 HL C++ library depends on HDF5 Library.
+libhdf5_hl_cpp_la_LIBADD=$(LIBH5_HL) $(LIBH5CPP)
+
+# Public headers
+include_HEADERS=H5PacketTable.h
+
+include $(top_srcdir)/config/conclude.am
diff --git a/hl/c++/src/Makefile.in b/hl/c++/src/Makefile.in
new file mode 100644
index 0000000..3153ec3
--- /dev/null
+++ b/hl/c++/src/Makefile.in
@@ -0,0 +1,1496 @@
+# Makefile.in generated by automake 1.15 from Makefile.am.
+# @configure_input@
+
+# Copyright (C) 1994-2014 Free Software Foundation, Inc.
+
+# This Makefile.in is free software; the Free Software Foundation
+# gives unlimited permission to copy and/or distribute it,
+# with or without modifications, as long as this notice is preserved.
+
+# This program is distributed in the hope that it will be useful,
+# but WITHOUT ANY WARRANTY, to the extent permitted by law; without
+# even the implied warranty of MERCHANTABILITY or FITNESS FOR A
+# PARTICULAR PURPOSE.
+
+@SET_MAKE@
+
+#
+# Copyright by The HDF Group.
+# Copyright by the Board of Trustees of the University of Illinois.
+# All rights reserved.
+#
+# This file is part of HDF5. The full HDF5 copyright notice, including
+# terms governing use, modification, and redistribution, is contained in
+# the COPYING file, which can be found at the root of the source code
+# distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases.
+# If you do not have access to either file, you may request a copy from
+# help@hdfgroup.org.
+#
+# HDF5-C++ Makefile(.in)
+#
+
+
+VPATH = @srcdir@
+am__is_gnu_make = { \
+ if test -z '$(MAKELEVEL)'; then \
+ false; \
+ elif test -n '$(MAKE_HOST)'; then \
+ true; \
+ elif test -n '$(MAKE_VERSION)' && test -n '$(CURDIR)'; then \
+ true; \
+ else \
+ false; \
+ fi; \
+}
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+ error=`grep "^$$ws*:test-result:$$ws*ERROR" $$results | wc -l`; \
+ if test `expr $$fail + $$xpass + $$error` -eq 0; then \
+ success=true; \
+ else \
+ success=false; \
+ fi; \
+ br='==================='; br=$$br$$br$$br$$br; \
+ result_count () \
+ { \
+ if test x"$$1" = x"--maybe-color"; then \
+ maybe_colorize=yes; \
+ elif test x"$$1" = x"--no-color"; then \
+ maybe_colorize=no; \
+ else \
+ echo "$@: invalid 'result_count' usage" >&2; exit 4; \
+ fi; \
+ shift; \
+ desc=$$1 count=$$2; \
+ if test $$maybe_colorize = yes && test $$count -gt 0; then \
+ color_start=$$3 color_end=$$std; \
+ else \
+ color_start= color_end=; \
+ fi; \
+ echo "$${color_start}# $$desc $$count$${color_end}"; \
+ }; \
+ create_testsuite_report () \
+ { \
+ result_count $$1 "TOTAL:" $$all "$$brg"; \
+ result_count $$1 "PASS: " $$pass "$$grn"; \
+ result_count $$1 "SKIP: " $$skip "$$blu"; \
+ result_count $$1 "XFAIL:" $$xfail "$$lgn"; \
+ result_count $$1 "FAIL: " $$fail "$$red"; \
+ result_count $$1 "XPASS:" $$xpass "$$red"; \
+ result_count $$1 "ERROR:" $$error "$$mgn"; \
+ }; \
+ { \
+ echo "$(PACKAGE_STRING): $(subdir)/$(TEST_SUITE_LOG)" | \
+ $(am__rst_title); \
+ create_testsuite_report --no-color; \
+ echo; \
+ echo ".. contents:: :depth: 2"; \
+ echo; \
+ for b in $$bases; do echo $$b; done \
+ | $(am__create_global_log); \
+ } >$(TEST_SUITE_LOG).tmp || exit 1; \
+ mv $(TEST_SUITE_LOG).tmp $(TEST_SUITE_LOG); \
+ if $$success; then \
+ col="$$grn"; \
+ else \
+ col="$$red"; \
+ test x"$$VERBOSE" = x || cat $(TEST_SUITE_LOG); \
+ fi; \
+ echo "$${col}$$br$${std}"; \
+ echo "$${col}Testsuite summary for $(PACKAGE_STRING)$${std}"; \
+ echo "$${col}$$br$${std}"; \
+ create_testsuite_report --maybe-color; \
+ echo "$$col$$br$$std"; \
+ if $$success; then :; else \
+ echo "$${col}See $(subdir)/$(TEST_SUITE_LOG)$${std}"; \
+ if test -n "$(PACKAGE_BUGREPORT)"; then \
+ echo "$${col}Please report to $(PACKAGE_BUGREPORT)$${std}"; \
+ fi; \
+ echo "$$col$$br$$std"; \
+ fi; \
+ $$success || exit 1
+recheck: all
+ @test -z "$(TEST_SUITE_LOG)" || rm -f $(TEST_SUITE_LOG)
+ @set +e; $(am__set_TESTS_bases); \
+ bases=`for i in $$bases; do echo $$i; done \
+ | $(am__list_recheck_tests)` || exit 1; \
+ log_list=`for i in $$bases; do echo $$i.log; done`; \
+ log_list=`echo $$log_list`; \
+ $(MAKE) $(AM_MAKEFLAGS) $(TEST_SUITE_LOG) \
+ am__force_recheck=am--force-recheck \
+ TEST_LOGS="$$log_list"; \
+ exit $$?
+.sh.log:
+ @p='$<'; \
+ $(am__set_b); \
+ $(am__check_pre) $(SH_LOG_DRIVER) --test-name "$$f" \
+ --log-file $$b.log --trs-file $$b.trs \
+ $(am__common_driver_flags) $(AM_SH_LOG_DRIVER_FLAGS) $(SH_LOG_DRIVER_FLAGS) -- $(SH_LOG_COMPILE) \
+ "$$tst" $(AM_TESTS_FD_REDIRECT)
+@am__EXEEXT_TRUE@.sh$(EXEEXT).log:
+@am__EXEEXT_TRUE@ @p='$<'; \
+@am__EXEEXT_TRUE@ $(am__set_b); \
+@am__EXEEXT_TRUE@ $(am__check_pre) $(SH_LOG_DRIVER) --test-name "$$f" \
+@am__EXEEXT_TRUE@ --log-file $$b.log --trs-file $$b.trs \
+@am__EXEEXT_TRUE@ $(am__common_driver_flags) $(AM_SH_LOG_DRIVER_FLAGS) $(SH_LOG_DRIVER_FLAGS) -- $(SH_LOG_COMPILE) \
+@am__EXEEXT_TRUE@ "$$tst" $(AM_TESTS_FD_REDIRECT)
+
+distdir: $(DISTFILES)
+ @srcdirstrip=`echo "$(srcdir)" | sed 's/[].[^$$\\*]/\\\\&/g'`; \
+ topsrcdirstrip=`echo "$(top_srcdir)" | sed 's/[].[^$$\\*]/\\\\&/g'`; \
+ list='$(DISTFILES)'; \
+ dist_files=`for file in $$list; do echo $$file; done | \
+ sed -e "s|^$$srcdirstrip/||;t" \
+ -e "s|^$$topsrcdirstrip/|$(top_builddir)/|;t"`; \
+ case $$dist_files in \
+ */*) $(MKDIR_P) `echo "$$dist_files" | \
+ sed '/\//!d;s|^|$(distdir)/|;s,/[^/]*$$,,' | \
+ sort -u` ;; \
+ esac; \
+ for file in $$dist_files; do \
+ if test -f $$file || test -d $$file; then d=.; else d=$(srcdir); fi; \
+ if test -d $$d/$$file; then \
+ dir=`echo "/$$file" | sed -e 's,/[^/]*$$,,'`; \
+ if test -d "$(distdir)/$$file"; then \
+ find "$(distdir)/$$file" -type d ! -perm -700 -exec chmod u+rwx {} \;; \
+ fi; \
+ if test -d $(srcdir)/$$file && test $$d != $(srcdir); then \
+ cp -fpR $(srcdir)/$$file "$(distdir)$$dir" || exit 1; \
+ find "$(distdir)/$$file" -type d ! -perm -700 -exec chmod u+rwx {} \;; \
+ fi; \
+ cp -fpR $$d/$$file "$(distdir)$$dir" || exit 1; \
+ else \
+ test -f "$(distdir)/$$file" \
+ || cp -p $$d/$$file "$(distdir)/$$file" \
+ || exit 1; \
+ fi; \
+ done
+check-am: all-am
+ $(MAKE) $(AM_MAKEFLAGS) check-TESTS
+check: check-am
+all-am: Makefile $(LTLIBRARIES) $(HEADERS) all-local
+installdirs:
+ for dir in "$(DESTDIR)$(libdir)" "$(DESTDIR)$(includedir)"; do \
+ test -z "$$dir" || $(MKDIR_P) "$$dir"; \
+ done
+install: install-am
+install-exec: install-exec-am
+install-data: install-data-am
+uninstall: uninstall-am
+
+install-am: all-am
+ @$(MAKE) $(AM_MAKEFLAGS) install-exec-am install-data-am
+
+installcheck: installcheck-am
+install-strip:
+ if test -z '$(STRIP)'; then \
+ $(MAKE) $(AM_MAKEFLAGS) INSTALL_PROGRAM="$(INSTALL_STRIP_PROGRAM)" \
+ install_sh_PROGRAM="$(INSTALL_STRIP_PROGRAM)" INSTALL_STRIP_FLAG=-s \
+ install; \
+ else \
+ $(MAKE) $(AM_MAKEFLAGS) INSTALL_PROGRAM="$(INSTALL_STRIP_PROGRAM)" \
+ install_sh_PROGRAM="$(INSTALL_STRIP_PROGRAM)" INSTALL_STRIP_FLAG=-s \
+ "INSTALL_PROGRAM_ENV=STRIPPROG='$(STRIP)'" install; \
+ fi
+mostlyclean-generic:
+ -test -z "$(TEST_LOGS)" || rm -f $(TEST_LOGS)
+ -test -z "$(TEST_LOGS:.log=.trs)" || rm -f $(TEST_LOGS:.log=.trs)
+ -test -z "$(TEST_SUITE_LOG)" || rm -f $(TEST_SUITE_LOG)
+
+clean-generic:
+
+distclean-generic:
+ -test -z "$(CONFIG_CLEAN_FILES)" || rm -f $(CONFIG_CLEAN_FILES)
+ -test . = "$(srcdir)" || test -z "$(CONFIG_CLEAN_VPATH_FILES)" || rm -f $(CONFIG_CLEAN_VPATH_FILES)
+
+maintainer-clean-generic:
+ @echo "This command is intended for maintainers to use"
+ @echo "it deletes files that may require special tools to rebuild."
+clean: clean-am
+
+clean-am: clean-generic clean-libLTLIBRARIES clean-libtool \
+ mostlyclean-am
+
+distclean: distclean-am
+ -rm -rf ./$(DEPDIR)
+ -rm -f Makefile
+distclean-am: clean-am distclean-compile distclean-generic \
+ distclean-tags
+
+dvi: dvi-am
+
+dvi-am:
+
+html: html-am
+
+html-am:
+
+info: info-am
+
+info-am:
+
+install-data-am: install-includeHEADERS
+
+install-dvi: install-dvi-am
+
+install-dvi-am:
+
+install-exec-am: install-libLTLIBRARIES
+
+install-html: install-html-am
+
+install-html-am:
+
+install-info: install-info-am
+
+install-info-am:
+
+install-man:
+
+install-pdf: install-pdf-am
+
+install-pdf-am:
+
+install-ps: install-ps-am
+
+install-ps-am:
+
+installcheck-am:
+
+maintainer-clean: maintainer-clean-am
+ -rm -rf ./$(DEPDIR)
+ -rm -f Makefile
+maintainer-clean-am: distclean-am maintainer-clean-generic
+
+mostlyclean: mostlyclean-am
+
+mostlyclean-am: mostlyclean-compile mostlyclean-generic \
+ mostlyclean-libtool mostlyclean-local
+
+pdf: pdf-am
+
+pdf-am:
+
+ps: ps-am
+
+ps-am:
+
+uninstall-am: uninstall-includeHEADERS uninstall-libLTLIBRARIES
+
+.MAKE: check-am install-am install-strip
+
+.PHONY: CTAGS GTAGS TAGS all all-am all-local check check-TESTS \
+ check-am clean clean-generic clean-libLTLIBRARIES \
+ clean-libtool cscopelist-am ctags ctags-am distclean \
+ distclean-compile distclean-generic distclean-libtool \
+ distclean-tags distdir dvi dvi-am html html-am info info-am \
+ install install-am install-data install-data-am install-dvi \
+ install-dvi-am install-exec install-exec-am install-html \
+ install-html-am install-includeHEADERS install-info \
+ install-info-am install-libLTLIBRARIES install-man install-pdf \
+ install-pdf-am install-ps install-ps-am install-strip \
+ installcheck installcheck-am installdirs maintainer-clean \
+ maintainer-clean-generic mostlyclean mostlyclean-compile \
+ mostlyclean-generic mostlyclean-libtool mostlyclean-local pdf \
+ pdf-am ps ps-am recheck tags tags-am uninstall uninstall-am \
+ uninstall-includeHEADERS uninstall-libLTLIBRARIES
+
+.PRECIOUS: Makefile
+
+
+# List all build rules defined by HDF5 Makefiles as "PHONY" targets here.
+# This tells the Makefiles that these targets are not files to be built but
+# commands that should be executed even if a file with the same name already
+# exists.
+.PHONY: build-check-clean build-check-p build-check-s build-lib build-progs \
+ build-tests check-clean check-install check-p check-s check-vfd \
+ install-doc lib progs tests uninstall-doc _exec_check-s _test help
+
+help:
+ @$(top_srcdir)/bin/makehelp
+
+# lib/progs/tests targets recurse into subdirectories. build-* targets
+# build files in this directory.
+build-dyn: $(DYN)
+build-lib: $(LIB)
+build-progs: $(LIB) $(PROGS)
+build-tests: $(LIB) $(PROGS) $(chk_TESTS)
+
+# General rule for recursive building targets.
+# BUILT_SOURCES contain targets that need to be built before anything else
+# in the directory (e.g., for Fortran type detection)
+lib dyn progs tests check-s check-p :: $(BUILT_SOURCES)
+ @$(MAKE) $(AM_MAKEFLAGS) build-$@ || exit 1;
+ @for d in X $(SUBDIRS); do \
+ if test $$d != X && test $$d != .; then \
+ (set -x; cd $$d && $(MAKE) $(AM_MAKEFLAGS) $@) || exit 1; \
+ fi; \
+ done
+
+# General rule for recursive cleaning targets. Like the rule above,
+# but doesn't require building BUILT_SOURCES.
+check-clean ::
+ @$(MAKE) $(AM_MAKEFLAGS) build-$@ || exit 1;
+ @for d in X $(SUBDIRS); do \
+ if test $$d != X && test $$d != .; then \
+ (set -x; cd $$d && $(MAKE) $(AM_MAKEFLAGS) $@) || exit 1; \
+ fi; \
+ done
+
+# Tell Automake to build tests when the user types `make all' (this is
+# not its default behavior). Also build EXTRA_LIB and EXTRA_PROG since
+# Automake won't build them automatically, either.
+all-local: $(EXTRA_LIB) $(EXTRA_PROG) $(chk_TESTS)
+
+# make install-doc doesn't do anything outside of doc directory, but
+# Makefiles should recognize it.
+# UPDATE: docs no longer reside in this build tree, so this target
+# is depreciated.
+install-doc uninstall-doc:
+ @echo "Nothing to be done."
+
+# clean up files generated by tests so they can be re-run.
+build-check-clean:
+ $(RM) -rf $(CHECK_CLEANFILES)
+
+# run check-clean whenever mostlyclean is run
+mostlyclean-local: build-check-clean
+
+# check-install is just a synonym for installcheck
+check-install: installcheck
+
+# Run each test in order, passing $(TEST_FLAGS) to the program.
+# Since tests are done in a shell loop, "make -i" does apply inside it.
+# Set HDF5_Make_Ignore to a non-blank string to ignore errors inside the loop.
+# The timestamps give a rough idea how much time the tests use.
+#
+# Note that targets in chk_TESTS (defined above) will be built when the user
+# types 'make tests' or 'make check', but only programs in TEST_PROG,
+# TEST_PROG_PARA, or TEST_SCRIPT will actually be executed.
+check-TESTS: test
+
+test _test:
+ @$(MAKE) build-check-s
+ @$(MAKE) build-check-p
+
+# Actual execution of check-s.
+build-check-s: $(LIB) $(PROGS) $(chk_TESTS)
+ @if test -n "$(TEST_PROG)$(TEST_SCRIPT)"; then \
+ echo "===Serial tests in `echo ${PWD} | sed -e s:.*/::` begin `date`==="; \
+ fi
+ @$(MAKE) $(AM_MAKEFLAGS) _exec_check-s
+ @if test -n "$(TEST_PROG)$(TEST_SCRIPT)"; then \
+ echo "===Serial tests in `echo ${PWD} | sed -e s:.*/::` ended `date`===";\
+ fi
+
+_exec_check-s: $(TEST_PROG_CHKEXE) $(TEST_SCRIPT_CHKSH)
+
+# The dummy.chkexe here prevents the target from being
+# empty if there are no tests in the current directory.
+# $${log} is the log file.
+# $${tname} is the name of test.
+$(TEST_PROG_CHKEXE) $(TEST_PROG_PARA_CHKEXE) dummy.chkexe_:
+ @if test "X$@" != "X.chkexe_" && test "X$@" != "Xdummy.chkexe_"; then \
+ tname=$(@:.chkexe_=)$(EXEEXT);\
+ log=$(@:.chkexe_=.chklog); \
+ echo "============================"; \
+ if $(top_srcdir)/bin/newer $(@:.chkexe_=.chkexe) $${tname}; then \
+ echo "No need to test $${tname} again."; \
+ else \
+ echo "============================" > $${log}; \
+ if test "X$(FORTRAN_API)" = "Xyes"; then \
+ echo "Fortran API: Testing $(HDF5_DRIVER) $${tname} $(TEST_FLAGS)"; \
+ echo "Fortran API: $(HDF5_DRIVER) $${tname} $(TEST_FLAGS) Test Log" >> $${log}; \
+ elif test "X$(CXX_API)" = "Xyes"; then \
+ echo "C++ API: Testing $(HDF5_DRIVER) $${tname} $(TEST_FLAGS)"; \
+ echo "C++ API: $(HDF5_DRIVER) $${tname} $(TEST_FLAGS) Test Log" >> $${log};\
+ else \
+ echo "Testing $(HDF5_DRIVER) $${tname} $(TEST_FLAGS)"; \
+ echo "$(HDF5_DRIVER) $${tname} $(TEST_FLAGS) Test Log" >> $${log}; \
+ fi; \
+ echo "============================" >> $${log}; \
+ srcdir="$(srcdir)" \
+ $(TIME) $(RUNEXEC) ./$${tname} $(TEST_FLAGS) >> $${log} 2>&1 \
+ && touch $(@:.chkexe_=.chkexe) || \
+ (test $$HDF5_Make_Ignore && echo "*** Error ignored") || \
+ (cat $${log} && false) || exit 1; \
+ echo "" >> $${log}; \
+ echo "Finished testing $${tname} $(TEST_FLAGS)" >> $${log}; \
+ echo "============================" >> $${log}; \
+ echo "Finished testing $${tname} $(TEST_FLAGS)"; \
+ cat $${log}; \
+ fi; \
+ fi
+
+# The dummysh.chkexe here prevents the target from being
+# empty if there are no tests in the current directory.
+# $${log} is the log file.
+# $${tname} is the name of test.
+$(TEST_SCRIPT_CHKSH) $(TEST_SCRIPT_PARA_CHKSH) dummysh.chkexe_:
+ @if test "X$@" != "X.chkexe_" && test "X$@" != "Xdummysh.chkexe_"; then \
+ cmd=$(@:.chkexe_=);\
+ tname=`basename $$cmd`;\
+ chkname=`basename $(@:.chkexe_=.chkexe)`;\
+ log=`basename $(@:.chkexe_=.chklog)`; \
+ echo "============================"; \
+ if $(top_srcdir)/bin/newer $${chkname} $$cmd $(SCRIPT_DEPEND); then \
+ echo "No need to test $${tname} again."; \
+ else \
+ echo "============================" > $${log}; \
+ if test "X$(FORTRAN_API)" = "Xyes"; then \
+ echo "Fortran API: Testing $${tname} $(TEST_FLAGS)"; \
+ echo "Fortran API: $${tname} $(TEST_FLAGS) Test Log" >> $${log}; \
+ elif test "X$(CXX_API)" = "Xyes"; then \
+ echo "C++ API: Testing $${tname} $(TEST_FLAGS)"; \
+ echo "C++ API: $${tname} $(TEST_FLAGS) Test Log" >> $${log}; \
+ else \
+ echo "Testing $${tname} $(TEST_FLAGS)"; \
+ echo "$${tname} $(TEST_FLAGS) Test Log" >> $${log}; \
+ fi; \
+ echo "============================" >> $${log}; \
+ RUNSERIAL="$(RUNSERIAL)" RUNPARALLEL="$(RUNPARALLEL)" \
+ srcdir="$(srcdir)" \
+ $(TIME) $(SHELL) $$cmd $(TEST_FLAGS) >> $${log} 2>&1 \
+ && touch $${chkname} || \
+ (test $$HDF5_Make_Ignore && echo "*** Error ignored") || \
+ (cat $${log} && false) || exit 1; \
+ echo "" >> $${log}; \
+ echo "Finished testing $${tname} $(TEST_FLAGS)" >> $${log}; \
+ echo "============================" >> $${log}; \
+ echo "Finished testing $${tname} $(TEST_FLAGS)"; \
+ cat $${log}; \
+ fi; \
+ echo "============================"; \
+ fi
+
+# Actual execution of check-p.
+build-check-p: $(LIB) $(PROGS) $(chk_TESTS)
+ @if test -n "$(TEST_PROG_PARA)$(TEST_SCRIPT_PARA)"; then \
+ echo "===Parallel tests in `echo ${PWD} | sed -e s:.*/::` begin `date`==="; \
+ fi
+ @if test -n "$(TEST_PROG_PARA)"; then \
+ echo "**** Hint ****"; \
+ echo "Parallel test files reside in the current directory" \
+ "by default."; \
+ echo "Set HDF5_PARAPREFIX to use another directory. E.g.,"; \
+ echo " HDF5_PARAPREFIX=/PFS/user/me"; \
+ echo " export HDF5_PARAPREFIX"; \
+ echo " make check"; \
+ echo "**** end of Hint ****"; \
+ fi
+ @for test in $(TEST_PROG_PARA) dummy; do \
+ if test $$test != dummy; then \
+ $(MAKE) $(AM_MAKEFLAGS) $$test.chkexe_ \
+ RUNEXEC="$(RUNPARALLEL)" || exit 1; \
+ fi; \
+ done
+ @for test in $(TEST_SCRIPT_PARA) dummy; do \
+ if test $$test != dummy; then \
+ $(MAKE) $(AM_MAKEFLAGS) $$test.chkexe_ || exit 1; \
+ fi; \
+ done
+ @if test -n "$(TEST_PROG_PARA)$(TEST_SCRIPT_PARA)"; then \
+ echo "===Parallel tests in `echo ${PWD} | sed -e s:.*/::` ended `date`===";\
+ fi
+
+# Run test with different Virtual File Driver
+check-vfd: $(LIB) $(PROGS) $(chk_TESTS)
+ @for vfd in $(VFD_LIST) dummy; do \
+ if test $$vfd != dummy; then \
+ echo "============================"; \
+ echo "Testing Virtual File Driver $$vfd"; \
+ echo "============================"; \
+ $(MAKE) $(AM_MAKEFLAGS) check-clean || exit 1; \
+ HDF5_DRIVER=$$vfd $(MAKE) $(AM_MAKEFLAGS) check || exit 1; \
+ fi; \
+ done
+
+# Tell versions [3.59,3.63) of GNU make to not export all variables.
+# Otherwise a system limit (for SysV at least) may be exceeded.
+.NOEXPORT:
diff --git a/hl/c++/test/CMakeLists.txt b/hl/c++/test/CMakeLists.txt
new file mode 100644
index 0000000..a2f9429
--- /dev/null
+++ b/hl/c++/test/CMakeLists.txt
@@ -0,0 +1,31 @@
+cmake_minimum_required (VERSION 3.2.2)
+PROJECT (HDF5_HL_CPP_TEST)
+
+#-----------------------------------------------------------------------------
+# Setup include Directories
+#-----------------------------------------------------------------------------
+INCLUDE_DIRECTORIES (${HDF5_HL_SRC_DIR}/src)
+INCLUDE_DIRECTORIES (${HDF5_HL_SRC_DIR}/c++/src)
+
+# --------------------------------------------------------------------
+# Add in the unit tests for the packet table c++ wrapper
+# --------------------------------------------------------------------
+
+INCLUDE_DIRECTORIES (${HDF5_TEST_SRC_DIR})
+INCLUDE_DIRECTORIES (${HDF5_HL_SRC_DIR}/test)
+INCLUDE_DIRECTORIES (${HDF5_CPP_SRC_DIR}/src)
+
+add_executable (hl_ptableTest ${HDF5_HL_CPP_TEST_SOURCE_DIR}/ptableTest.cpp)
+TARGET_C_PROPERTIES (hl_ptableTest STATIC " " " ")
+TARGET_NAMING (hl_ptableTest STATIC)
+target_link_libraries (
+ hl_ptableTest
+ ${HDF5_LIB_TARGET}
+ ${HDF5_TEST_LIB_TARGET}
+ ${HDF5_CPP_LIB_TARGET}
+ ${HDF5_HL_LIB_TARGET}
+ ${HDF5_HL_CPP_LIB_TARGET}
+)
+set_target_properties (hl_ptableTest PROPERTIES FOLDER test/hl/cpp)
+
+include (CMakeTests.cmake)
diff --git a/hl/c++/test/CMakeTests.cmake b/hl/c++/test/CMakeTests.cmake
new file mode 100644
index 0000000..785abca
--- /dev/null
+++ b/hl/c++/test/CMakeTests.cmake
@@ -0,0 +1,32 @@
+#
+# Copyright by The HDF Group.
+# All rights reserved.
+#
+# This file is part of HDF5. The full HDF5 copyright notice, including
+# terms governing use, modification, and redistribution, is contained in
+# the COPYING file, which can be found at the root of the source code
+# distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases.
+# If you do not have access to either file, you may request a copy from
+# help@hdfgroup.org.
+#
+
+##############################################################################
+##############################################################################
+### T E S T I N G ###
+##############################################################################
+##############################################################################
+
+if (HDF5_ENABLE_USING_MEMCHECKER)
+ add_test (NAME HL_CPP_ptableTest COMMAND $<TARGET_FILE:hl_ptableTest>)
+else ()
+ add_test (NAME HL_CPP_ptableTest COMMAND "${CMAKE_COMMAND}"
+ -D "TEST_PROGRAM=$<TARGET_FILE:hl_ptableTest>"
+ -D "TEST_ARGS:STRING="
+ -D "TEST_EXPECT=0"
+ -D "TEST_SKIP_COMPARE=TRUE"
+ -D "TEST_OUTPUT=hl_ptableTest.txt"
+ #-D "TEST_REFERENCE=hl_ptableTest.out"
+ -D "TEST_FOLDER=${PROJECT_BINARY_DIR}"
+ -P "${HDF_RESOURCES_EXT_DIR}/runTest.cmake"
+ )
+endif ()
diff --git a/hl/c++/test/Makefile.am b/hl/c++/test/Makefile.am
new file mode 100644
index 0000000..7031c34
--- /dev/null
+++ b/hl/c++/test/Makefile.am
@@ -0,0 +1,37 @@
+#
+# Copyright by The HDF Group.
+# Copyright by the Board of Trustees of the University of Illinois.
+# All rights reserved.
+#
+# This file is part of HDF5. The full HDF5 copyright notice, including
+# terms governing use, modification, and redistribution, is contained in
+# the COPYING file, which can be found at the root of the source code
+# distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases.
+# If you do not have access to either file, you may request a copy from
+# help@hdfgroup.org.
+##
+## Makefile.am
+## Run automake to generate a Makefile.in from this file.
+#
+# HDF5-C++ Makefile(.in)
+#
+
+include $(top_srcdir)/config/commence.am
+
+# Include directories
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+# Shell commands used in Makefiles
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+ echo "$(PACKAGE_STRING): $(subdir)/$(TEST_SUITE_LOG)" | \
+ $(am__rst_title); \
+ create_testsuite_report --no-color; \
+ echo; \
+ echo ".. contents:: :depth: 2"; \
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+ echo "$${col}$$br$${std}"; \
+ create_testsuite_report --maybe-color; \
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+ if $$success; then :; else \
+ echo "$${col}See $(subdir)/$(TEST_SUITE_LOG)$${std}"; \
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+distdir: $(DISTFILES)
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+ esac; \
+ for file in $$dist_files; do \
+ if test -f $$file || test -d $$file; then d=.; else d=$(srcdir); fi; \
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+ test -f "$(distdir)/$$file" \
+ || cp -p $$d/$$file "$(distdir)/$$file" \
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+ $(MAKE) $(AM_MAKEFLAGS) $(check_PROGRAMS)
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+ $(MAKE) $(AM_MAKEFLAGS) INSTALL_PROGRAM="$(INSTALL_STRIP_PROGRAM)" \
+ install_sh_PROGRAM="$(INSTALL_STRIP_PROGRAM)" INSTALL_STRIP_FLAG=-s \
+ install; \
+ else \
+ $(MAKE) $(AM_MAKEFLAGS) INSTALL_PROGRAM="$(INSTALL_STRIP_PROGRAM)" \
+ install_sh_PROGRAM="$(INSTALL_STRIP_PROGRAM)" INSTALL_STRIP_FLAG=-s \
+ "INSTALL_PROGRAM_ENV=STRIPPROG='$(STRIP)'" install; \
+ fi
+mostlyclean-generic:
+ -test -z "$(TEST_LOGS)" || rm -f $(TEST_LOGS)
+ -test -z "$(TEST_LOGS:.log=.trs)" || rm -f $(TEST_LOGS:.log=.trs)
+ -test -z "$(TEST_SUITE_LOG)" || rm -f $(TEST_SUITE_LOG)
+
+clean-generic:
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+distclean-generic:
+ -test -z "$(CONFIG_CLEAN_FILES)" || rm -f $(CONFIG_CLEAN_FILES)
+ -test . = "$(srcdir)" || test -z "$(CONFIG_CLEAN_VPATH_FILES)" || rm -f $(CONFIG_CLEAN_VPATH_FILES)
+
+maintainer-clean-generic:
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+ @echo "it deletes files that may require special tools to rebuild."
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+
+clean-am: clean-checkPROGRAMS clean-generic clean-libtool \
+ mostlyclean-am
+
+distclean: distclean-am
+ -rm -rf ./$(DEPDIR)
+ -rm -f Makefile
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+ distclean-tags
+
+dvi: dvi-am
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+ pdf-am ps ps-am recheck tags tags-am uninstall uninstall-am
+
+.PRECIOUS: Makefile
+
+
+# List all build rules defined by HDF5 Makefiles as "PHONY" targets here.
+# This tells the Makefiles that these targets are not files to be built but
+# commands that should be executed even if a file with the same name already
+# exists.
+.PHONY: build-check-clean build-check-p build-check-s build-lib build-progs \
+ build-tests check-clean check-install check-p check-s check-vfd \
+ install-doc lib progs tests uninstall-doc _exec_check-s _test help
+
+help:
+ @$(top_srcdir)/bin/makehelp
+
+# lib/progs/tests targets recurse into subdirectories. build-* targets
+# build files in this directory.
+build-dyn: $(DYN)
+build-lib: $(LIB)
+build-progs: $(LIB) $(PROGS)
+build-tests: $(LIB) $(PROGS) $(chk_TESTS)
+
+# General rule for recursive building targets.
+# BUILT_SOURCES contain targets that need to be built before anything else
+# in the directory (e.g., for Fortran type detection)
+lib dyn progs tests check-s check-p :: $(BUILT_SOURCES)
+ @$(MAKE) $(AM_MAKEFLAGS) build-$@ || exit 1;
+ @for d in X $(SUBDIRS); do \
+ if test $$d != X && test $$d != .; then \
+ (set -x; cd $$d && $(MAKE) $(AM_MAKEFLAGS) $@) || exit 1; \
+ fi; \
+ done
+
+# General rule for recursive cleaning targets. Like the rule above,
+# but doesn't require building BUILT_SOURCES.
+check-clean ::
+ @$(MAKE) $(AM_MAKEFLAGS) build-$@ || exit 1;
+ @for d in X $(SUBDIRS); do \
+ if test $$d != X && test $$d != .; then \
+ (set -x; cd $$d && $(MAKE) $(AM_MAKEFLAGS) $@) || exit 1; \
+ fi; \
+ done
+
+# Tell Automake to build tests when the user types `make all' (this is
+# not its default behavior). Also build EXTRA_LIB and EXTRA_PROG since
+# Automake won't build them automatically, either.
+all-local: $(EXTRA_LIB) $(EXTRA_PROG) $(chk_TESTS)
+
+# make install-doc doesn't do anything outside of doc directory, but
+# Makefiles should recognize it.
+# UPDATE: docs no longer reside in this build tree, so this target
+# is depreciated.
+install-doc uninstall-doc:
+ @echo "Nothing to be done."
+
+# clean up files generated by tests so they can be re-run.
+build-check-clean:
+ $(RM) -rf $(CHECK_CLEANFILES)
+
+# run check-clean whenever mostlyclean is run
+mostlyclean-local: build-check-clean
+
+# check-install is just a synonym for installcheck
+check-install: installcheck
+
+# Run each test in order, passing $(TEST_FLAGS) to the program.
+# Since tests are done in a shell loop, "make -i" does apply inside it.
+# Set HDF5_Make_Ignore to a non-blank string to ignore errors inside the loop.
+# The timestamps give a rough idea how much time the tests use.
+#
+# Note that targets in chk_TESTS (defined above) will be built when the user
+# types 'make tests' or 'make check', but only programs in TEST_PROG,
+# TEST_PROG_PARA, or TEST_SCRIPT will actually be executed.
+check-TESTS: test
+
+test _test:
+ @$(MAKE) build-check-s
+ @$(MAKE) build-check-p
+
+# Actual execution of check-s.
+build-check-s: $(LIB) $(PROGS) $(chk_TESTS)
+ @if test -n "$(TEST_PROG)$(TEST_SCRIPT)"; then \
+ echo "===Serial tests in `echo ${PWD} | sed -e s:.*/::` begin `date`==="; \
+ fi
+ @$(MAKE) $(AM_MAKEFLAGS) _exec_check-s
+ @if test -n "$(TEST_PROG)$(TEST_SCRIPT)"; then \
+ echo "===Serial tests in `echo ${PWD} | sed -e s:.*/::` ended `date`===";\
+ fi
+
+_exec_check-s: $(TEST_PROG_CHKEXE) $(TEST_SCRIPT_CHKSH)
+
+# The dummy.chkexe here prevents the target from being
+# empty if there are no tests in the current directory.
+# $${log} is the log file.
+# $${tname} is the name of test.
+$(TEST_PROG_CHKEXE) $(TEST_PROG_PARA_CHKEXE) dummy.chkexe_:
+ @if test "X$@" != "X.chkexe_" && test "X$@" != "Xdummy.chkexe_"; then \
+ tname=$(@:.chkexe_=)$(EXEEXT);\
+ log=$(@:.chkexe_=.chklog); \
+ echo "============================"; \
+ if $(top_srcdir)/bin/newer $(@:.chkexe_=.chkexe) $${tname}; then \
+ echo "No need to test $${tname} again."; \
+ else \
+ echo "============================" > $${log}; \
+ if test "X$(FORTRAN_API)" = "Xyes"; then \
+ echo "Fortran API: Testing $(HDF5_DRIVER) $${tname} $(TEST_FLAGS)"; \
+ echo "Fortran API: $(HDF5_DRIVER) $${tname} $(TEST_FLAGS) Test Log" >> $${log}; \
+ elif test "X$(CXX_API)" = "Xyes"; then \
+ echo "C++ API: Testing $(HDF5_DRIVER) $${tname} $(TEST_FLAGS)"; \
+ echo "C++ API: $(HDF5_DRIVER) $${tname} $(TEST_FLAGS) Test Log" >> $${log};\
+ else \
+ echo "Testing $(HDF5_DRIVER) $${tname} $(TEST_FLAGS)"; \
+ echo "$(HDF5_DRIVER) $${tname} $(TEST_FLAGS) Test Log" >> $${log}; \
+ fi; \
+ echo "============================" >> $${log}; \
+ srcdir="$(srcdir)" \
+ $(TIME) $(RUNEXEC) ./$${tname} $(TEST_FLAGS) >> $${log} 2>&1 \
+ && touch $(@:.chkexe_=.chkexe) || \
+ (test $$HDF5_Make_Ignore && echo "*** Error ignored") || \
+ (cat $${log} && false) || exit 1; \
+ echo "" >> $${log}; \
+ echo "Finished testing $${tname} $(TEST_FLAGS)" >> $${log}; \
+ echo "============================" >> $${log}; \
+ echo "Finished testing $${tname} $(TEST_FLAGS)"; \
+ cat $${log}; \
+ fi; \
+ fi
+
+# The dummysh.chkexe here prevents the target from being
+# empty if there are no tests in the current directory.
+# $${log} is the log file.
+# $${tname} is the name of test.
+$(TEST_SCRIPT_CHKSH) $(TEST_SCRIPT_PARA_CHKSH) dummysh.chkexe_:
+ @if test "X$@" != "X.chkexe_" && test "X$@" != "Xdummysh.chkexe_"; then \
+ cmd=$(@:.chkexe_=);\
+ tname=`basename $$cmd`;\
+ chkname=`basename $(@:.chkexe_=.chkexe)`;\
+ log=`basename $(@:.chkexe_=.chklog)`; \
+ echo "============================"; \
+ if $(top_srcdir)/bin/newer $${chkname} $$cmd $(SCRIPT_DEPEND); then \
+ echo "No need to test $${tname} again."; \
+ else \
+ echo "============================" > $${log}; \
+ if test "X$(FORTRAN_API)" = "Xyes"; then \
+ echo "Fortran API: Testing $${tname} $(TEST_FLAGS)"; \
+ echo "Fortran API: $${tname} $(TEST_FLAGS) Test Log" >> $${log}; \
+ elif test "X$(CXX_API)" = "Xyes"; then \
+ echo "C++ API: Testing $${tname} $(TEST_FLAGS)"; \
+ echo "C++ API: $${tname} $(TEST_FLAGS) Test Log" >> $${log}; \
+ else \
+ echo "Testing $${tname} $(TEST_FLAGS)"; \
+ echo "$${tname} $(TEST_FLAGS) Test Log" >> $${log}; \
+ fi; \
+ echo "============================" >> $${log}; \
+ RUNSERIAL="$(RUNSERIAL)" RUNPARALLEL="$(RUNPARALLEL)" \
+ srcdir="$(srcdir)" \
+ $(TIME) $(SHELL) $$cmd $(TEST_FLAGS) >> $${log} 2>&1 \
+ && touch $${chkname} || \
+ (test $$HDF5_Make_Ignore && echo "*** Error ignored") || \
+ (cat $${log} && false) || exit 1; \
+ echo "" >> $${log}; \
+ echo "Finished testing $${tname} $(TEST_FLAGS)" >> $${log}; \
+ echo "============================" >> $${log}; \
+ echo "Finished testing $${tname} $(TEST_FLAGS)"; \
+ cat $${log}; \
+ fi; \
+ echo "============================"; \
+ fi
+
+# Actual execution of check-p.
+build-check-p: $(LIB) $(PROGS) $(chk_TESTS)
+ @if test -n "$(TEST_PROG_PARA)$(TEST_SCRIPT_PARA)"; then \
+ echo "===Parallel tests in `echo ${PWD} | sed -e s:.*/::` begin `date`==="; \
+ fi
+ @if test -n "$(TEST_PROG_PARA)"; then \
+ echo "**** Hint ****"; \
+ echo "Parallel test files reside in the current directory" \
+ "by default."; \
+ echo "Set HDF5_PARAPREFIX to use another directory. E.g.,"; \
+ echo " HDF5_PARAPREFIX=/PFS/user/me"; \
+ echo " export HDF5_PARAPREFIX"; \
+ echo " make check"; \
+ echo "**** end of Hint ****"; \
+ fi
+ @for test in $(TEST_PROG_PARA) dummy; do \
+ if test $$test != dummy; then \
+ $(MAKE) $(AM_MAKEFLAGS) $$test.chkexe_ \
+ RUNEXEC="$(RUNPARALLEL)" || exit 1; \
+ fi; \
+ done
+ @for test in $(TEST_SCRIPT_PARA) dummy; do \
+ if test $$test != dummy; then \
+ $(MAKE) $(AM_MAKEFLAGS) $$test.chkexe_ || exit 1; \
+ fi; \
+ done
+ @if test -n "$(TEST_PROG_PARA)$(TEST_SCRIPT_PARA)"; then \
+ echo "===Parallel tests in `echo ${PWD} | sed -e s:.*/::` ended `date`===";\
+ fi
+
+# Run test with different Virtual File Driver
+check-vfd: $(LIB) $(PROGS) $(chk_TESTS)
+ @for vfd in $(VFD_LIST) dummy; do \
+ if test $$vfd != dummy; then \
+ echo "============================"; \
+ echo "Testing Virtual File Driver $$vfd"; \
+ echo "============================"; \
+ $(MAKE) $(AM_MAKEFLAGS) check-clean || exit 1; \
+ HDF5_DRIVER=$$vfd $(MAKE) $(AM_MAKEFLAGS) check || exit 1; \
+ fi; \
+ done
+
+# Tell versions [3.59,3.63) of GNU make to not export all variables.
+# Otherwise a system limit (for SysV at least) may be exceeded.
+.NOEXPORT:
diff --git a/hl/c++/test/ptableTest.cpp b/hl/c++/test/ptableTest.cpp
new file mode 100644
index 0000000..340912e
--- /dev/null
+++ b/hl/c++/test/ptableTest.cpp
@@ -0,0 +1,693 @@
+/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
+ * Copyright by The HDF Group. *
+ * Copyright by the Board of Trustees of the University of Illinois. *
+ * All rights reserved. *
+ * *
+ * This file is part of HDF5. The full HDF5 copyright notice, including *
+ * terms governing use, modification, and redistribution, is contained in *
+ * the COPYING file, which can be found at the root of the source code *
+ * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. *
+ * If you do not have access to either file, you may request a copy from *
+ * help@hdfgroup.org. *
+ * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
+
+/* ptableTest.cpp */
+
+#include <iostream>
+#include "ptableTest.h"
+
+using namespace H5;
+using namespace std;
+
+#define TEST_FILE "packettest.h5"
+
+/* Main test function */
+int main(void)
+{
+ herr_t err;
+ herr_t num_errors = 0;
+
+ /* Create new HDF5 file */
+ fileID = H5Fcreate(TEST_FILE, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
+ if(fileID <0)
+ {
+ fprintf(stderr, "Couldn't create file.\n");
+ num_errors = 1;
+ }
+ else {
+
+ num_errors += BasicTest();
+
+ num_errors += TestCompoundDatatype();
+
+ num_errors += TestGetPacket();
+
+ num_errors += TestGetNext();
+
+ num_errors += TestCompress();
+
+ num_errors += TestErrors();
+
+ num_errors += SystemTest();
+
+ /* Test data corruption in packed structs */
+ num_errors += TestHDFFV_9758();
+
+ /* Terminate access to the file. */
+ err = H5Fclose(fileID);
+ if( err < 0 )
+ {
+ fprintf(stderr, "Failed to close file.\n");
+ num_errors++;
+ }
+
+ /* Delete the file */
+ remove(TEST_FILE);
+ }
+
+ if (num_errors == 0)
+ /* ALL TESTS PASSED */
+ return 0;
+ else
+ /* ERRORS */
+ return -1;
+}
+
+const char* BASICTEST_PT("/basicTest");
+int BasicTest()
+{
+ herr_t err;
+ int myRecord;
+ hsize_t count;
+ int error;
+
+ TESTING("basic functionality")
+
+ FL_PacketTable wrapper(fileID, H5P_DEFAULT, BASICTEST_PT, H5T_NATIVE_INT, 1);
+ if(! wrapper.IsValid())
+ goto error;
+
+ /* Ensure initial count is zero */
+ count = wrapper.GetPacketCount(error);
+ if(count != 0 || error != 0)
+ goto error;
+
+ myRecord = 1;
+
+ /* add some records test */
+ err = wrapper.AppendPacket(&myRecord);
+ if(err < 0)
+ goto error;
+
+ myRecord = 2;
+
+ wrapper.AppendPacket(&myRecord);
+
+ /* get number of records test */
+ count = wrapper.GetPacketCount();
+ if(count != 2)
+ goto error;
+
+ /* get records test */
+ err = wrapper.GetPacket(0, &myRecord);
+ if(err < 0)
+ goto error;
+
+ if(myRecord != 1)
+ goto error;
+
+ err = wrapper.GetPacket(1, &myRecord);
+ if(err < 0)
+ goto error;
+ if(myRecord != 2)
+ goto error;
+
+ PASSED();
+ return 0;
+
+error:
+ H5_FAILED();
+ return 1;
+}
+
+const char* CMPDTEST_PT("/compoundTest");
+int TestCompoundDatatype()
+{
+ hid_t dtypeID;
+ hsize_t count;
+ int error;
+
+ TESTING("compound datatypes")
+
+ /* Create compound datatype */
+ typedef struct compoundType
+ {
+ short a, b, c;
+ int e;
+ } compoundType;
+
+ dtypeID = H5Tcreate( H5T_COMPOUND, sizeof(compoundType));
+
+ H5Tinsert(dtypeID, "abbey", HOFFSET( compoundType, a ), H5T_NATIVE_SHORT);
+ H5Tinsert(dtypeID, "bert", HOFFSET( compoundType, b ), H5T_NATIVE_SHORT);
+ H5Tinsert(dtypeID, "charlie", HOFFSET( compoundType, c ), H5T_NATIVE_SHORT);
+ H5Tinsert(dtypeID, "ebert", HOFFSET( compoundType, e ), H5T_NATIVE_INT);
+
+ /* Create packet table using default property list. */
+ FL_PacketTable wrapper(fileID, H5P_DEFAULT, CMPDTEST_PT, dtypeID, 1);
+
+ if(! wrapper.IsValid())
+ goto error;
+
+ compoundType first;
+ first.a = 1;
+ first.b = first.c = 3;
+ first.e = 5;
+
+ /* Write packet */
+ wrapper.AppendPacket(&first);
+
+ count = wrapper.GetPacketCount(error);
+ if(count != 1)
+ goto error;
+
+ first.a = first.b = first.c = 0;
+ first.e = 0;
+
+ /* Read packet back */
+ wrapper.GetPacket(0, &first);
+
+ if(first.a != 1)
+ goto error;
+ if(first.e != 5)
+ goto error;
+
+ PASSED();
+
+ H5Tclose(dtypeID);
+ return 0;
+
+error:
+
+ H5E_BEGIN_TRY {
+ H5Tclose(dtypeID);
+ } H5E_END_TRY;
+
+
+ H5_FAILED();
+ return 1;
+}
+
+const char* GETNEXT_PT("/TestGetNext");
+int TestGetNext()
+{
+ int error;
+ int record;
+ int records[2];
+ int i;
+
+ TESTING("GetNextPacket")
+
+ /* Create a dataset */
+ FL_PacketTable wrapper(fileID, H5P_DEFAULT, GETNEXT_PT, H5T_NATIVE_INT, 500);
+
+ if(! wrapper.IsValid())
+ goto error;
+
+ /* Append 5 records to the dataset */
+ for(record = 1; record < 6; record++)
+ wrapper.AppendPacket(&record);
+
+ /* Ensure that we can interate through the records and get the right ones */
+ for(i = 1; i < 6; i++)
+ {
+ wrapper.GetNextPacket(&record);
+ if(record != i)
+ goto error;
+ }
+
+ /* Reset the index and check that it worked */
+ wrapper.ResetIndex();
+ if(wrapper.GetIndex(error) != 0) goto error;
+ if(error < 0) goto error;
+
+ /* Ensure that we can interate through the records and get the right ones */
+ for(i = 1; i < 6; i++)
+ {
+ error = wrapper.GetNextPacket(&record);
+ if(record != i || error <0)
+ goto error;
+ }
+
+ wrapper.SetIndex(1);
+ if(wrapper.GetIndex(error) != 1) goto error;
+ if(error < 0) goto error;
+
+ /* Ensure we can get multiple records with our index pointer */
+ wrapper.GetNextPackets(2, records);
+ if(records[0] != 2 || records[1] != 3)
+ goto error;
+
+ /* Ensure our pointer was updated correctly */
+ wrapper.GetNextPacket(&record);
+ if(record != 4)
+ goto error;
+
+ PASSED();
+ return 0;
+
+error:
+ H5_FAILED();
+ return 1;
+}
+
+const char* COMPRESS_PT("/compressTest");
+int TestCompress()
+{
+ unsigned int flags = 0;
+ unsigned int config = 0;
+ size_t cd_nelemts = 0;
+
+ TESTING("compression")
+#ifdef H5_HAVE_FILTER_DEFLATE
+ try {
+ /* Prepare property list to set compression, randomly use deflate */
+ DSetCreatPropList dscreatplist;
+ dscreatplist.setDeflate(6);
+
+ /* Create packet table with compression. */
+ FL_PacketTable wrapper(fileID, COMPRESS_PT, H5T_NATIVE_CHAR, 100, dscreatplist.getId());
+
+ /* Close the property list */
+ dscreatplist.close();
+
+ /* Verify that the deflate filter is set */
+
+ /* Create an HDF5 C++ file object */
+ H5File file;
+ file.setId(fileID);
+
+ /* Make sure that the deflate filter is set by opening the packet table
+ * as a dataset and getting its creation property list */
+ DataSet dset = file.openDataSet(COMPRESS_PT);
+
+ DSetCreatPropList dcpl = dset.getCreatePlist();
+
+ char filter_name[8];
+ dcpl.getFilterById(H5Z_FILTER_DEFLATE, flags, cd_nelemts, NULL, 8, filter_name, config);
+ if (HDstrncmp(filter_name, "deflate", 7) != 0)
+ H5_FAILED()
+ } catch (Exception e) {
+ H5_FAILED();
+ return 1;
+ }
+ PASSED();
+#else
+ SKIPPED();
+ puts(" deflate filter not enabled");
+#endif /* H5_HAVE_FILTER_DEFLATE */
+ return 0;
+}
+
+const char* PT_TESTGETPT = "/TestGetPacket";
+int TestGetPacket()
+{
+ int record;
+ int theRecs[3];
+ int i;
+ TESTING("GetPacket")
+
+ /* Create a dataset. Does not need to specify property list because
+ there is no compression. */
+ FL_PacketTable wrapper(fileID, PT_TESTGETPT, H5T_NATIVE_INT, 1);
+
+ if(! wrapper.IsValid())
+ goto error;
+
+ /* Append 5 records to the dataset */
+ for(record = 1; record < 6; record++)
+ wrapper.AppendPacket(&record);
+
+ /* Ensure that the records were written properly */
+ wrapper.GetPacket(1, &record);
+ if(record != 2)
+ goto error;
+
+ /* Ensure that we can retrieve multiple records */
+ wrapper.GetPackets(1, 3, theRecs);
+ for(i = 0; i < 3; i++)
+ {
+ if(theRecs[i] != i+2)
+ goto error;
+ }
+
+ PASSED();
+ return 0;
+
+error:
+ H5_FAILED();
+ return 1;
+}
+
+const char* PT_TESTERROR = "/TestErrors";
+
+int TestErrors()
+{
+ TESTING("error conditions")
+
+ /* Create a dataset */
+ FL_PacketTable wrapper(fileID, PT_TESTERROR, H5T_NATIVE_INT, 1);
+
+ if(! wrapper.IsValid())
+ goto error;
+
+ int record;
+ int records[3];
+ int error;
+
+ /* Append 4 records to the dataset */
+ for(record = 1; record < 5; record++)
+ wrapper.AppendPacket(&record);
+
+ /* Try to confuse functions with bad indexes */
+ error = wrapper.GetPacket(static_cast<unsigned>(-1), &record);
+ if(error >= 0)
+ goto error;
+ error = wrapper.GetPacket(4, &record);
+ if(error >= 0)
+ goto error;
+ error = wrapper.GetPacket(static_cast<unsigned>(-250), &record);
+ if(error >= 0)
+ goto error;
+ error = wrapper.GetPacket(3000, &record);
+ if(error >= 0)
+ goto error;
+ error = wrapper.GetPacket(1, &record);
+ if(error < 0)
+ goto error;
+
+ error = wrapper.GetPackets(static_cast<unsigned>(-1), 1, records);
+ if(error >= 0)
+ goto error;
+ error = wrapper.GetPackets(2, 4, records);
+ if(error >= 0)
+ goto error;
+ error = wrapper.GetPackets(static_cast<unsigned>(-60), static_cast<unsigned>(-62), records);
+ if(error >= 0)
+ goto error;
+ error = wrapper.GetPackets(10, 12, records);
+ if(error >= 0)
+ goto error;
+ error = wrapper.GetPackets(0, 2, records);
+ if(error < 0)
+ goto error;
+ error = wrapper.GetPackets(2, 0, records);
+ if(error >= 0)
+ goto error;
+ error = wrapper.GetPackets(1, 1, records);
+ if(error < 0)
+ goto error;
+ error = wrapper.GetPackets(1, 3, records);
+ if(error < 0)
+ goto error;
+
+ wrapper.ResetIndex();
+ error = wrapper.SetIndex(static_cast<unsigned>(-1));
+ if(error >= 0)
+ goto error;
+ if(wrapper.GetIndex(error) != 0) goto error;
+ if(error < 0) goto error;
+ error = wrapper.GetNextPacket(&record);
+ if(error < 0)
+ goto error;
+ if(record != 1)
+ goto error;
+ if(wrapper.GetIndex(error) != 1) goto error;
+ if(error < 0) goto error;
+ error = wrapper.SetIndex(20);
+ if(error >= 0)
+ goto error;
+ error = wrapper.GetNextPacket(&record);
+ if(error < 0)
+ goto error;
+ if(record != 2)
+ goto error;
+ wrapper.SetIndex(3);
+ error = wrapper.GetNextPacket(&record);
+ if(error < 0)
+ goto error;
+ if(record != 4)
+ goto error;
+ if(wrapper.GetIndex(error) != 4) goto error;
+ if(error < 0) goto error;
+ error = wrapper.GetNextPacket(&record);
+ if(error >= 0)
+ goto error;
+
+ wrapper.ResetIndex();
+ error = wrapper.GetNextPackets(10, records);
+ if(error >= 0)
+ goto error;
+ error = wrapper.GetNextPackets(0, records);
+ if(error < 0)
+ goto error;
+
+ PASSED();
+ return 0;
+
+error:
+ H5_FAILED();
+ return 1;
+}
+
+const char* PT_SYSTEMTST1 = "/SystemTest1";
+const char* PT_SYSTEMTST2 = "/SystemTest2";
+int SystemTest()
+{
+ TESTING("multiple datatypes")
+
+ hid_t dtypeID1, dtypeID2;
+ hsize_t count;
+ int error;
+
+ /* Creating two inter-related datatypes. Create two datasets and put
+ * one datatype in each. */
+ typedef struct compoundType
+ {
+ short a, b, c;
+ int e;
+ } compoundType;
+
+ dtypeID1 = H5Tcreate(H5T_COMPOUND, sizeof(compoundType));
+
+ H5Tinsert(dtypeID1, "abbey", HOFFSET( compoundType, a ), H5T_NATIVE_SHORT);
+ H5Tinsert(dtypeID1, "bert", HOFFSET( compoundType, b ), H5T_NATIVE_SHORT);
+ H5Tinsert(dtypeID1, "charlie", HOFFSET( compoundType, c ), H5T_NATIVE_SHORT);
+ H5Tinsert(dtypeID1, "ebert", HOFFSET( compoundType, e ), H5T_NATIVE_INT);
+
+ typedef struct cType2
+ {
+ char f;
+ compoundType g;
+ } cType2;
+
+ dtypeID2 = H5Tcreate(H5T_COMPOUND, sizeof(cType2));
+
+ H5Tinsert(dtypeID2, "f", HOFFSET( cType2, f ), H5T_NATIVE_CHAR);
+ H5Tinsert(dtypeID2, "g", HOFFSET( cType2, g ), dtypeID1);
+
+ cType2 ct2[10];
+ ct2[0].f = 'h';
+ ct2[0].g.a = 9;
+ ct2[0].g.b = -13;
+ ct2[0].g.c = 0;
+ ct2[0].g.e = 3000;
+
+ /* Create the packet table datasets. One used a deprecated constructor */
+ FL_PacketTable wrapper1(fileID, PT_SYSTEMTST1, dtypeID1, 1);
+ FL_PacketTable wrapper2(fileID, H5P_DEFAULT, PT_SYSTEMTST2, dtypeID2, 1);
+
+ if(! wrapper1.IsValid())
+ goto error;
+ if(! wrapper2.IsValid())
+ goto error;
+
+ /* Write and read packets, ensure that nothing is unusual */
+ wrapper2.AppendPacket(ct2);
+
+ count = wrapper1.GetPacketCount();
+ if(count != 0)
+ goto error;
+
+ compoundType ct1[10];
+ ct1[0].a = 31;
+ ct1[0].b = 4607;
+ ct1[0].c = -1002;
+ ct1[0].e = 3;
+
+ ct2[1].f = 'b';
+ ct2[1].g = ct1[0];
+
+ wrapper1.AppendPacket(ct1);
+ wrapper2.AppendPacket(&ct2[1]);
+
+ wrapper1.ResetIndex();
+ wrapper1.GetNextPacket(&ct1[1]);
+ wrapper2.GetPacket(1, &ct2[2]);
+ if(wrapper1.GetIndex(error) != 1) goto error;
+ if(error < 0) goto error;
+ if(wrapper2.GetIndex(error) != 0) goto error;
+ if(error < 0) goto error;
+
+ if(ct1[1].b != ct2[2].g.b)
+ goto error;
+
+ H5Tclose(dtypeID1);
+ H5Tclose(dtypeID2);
+
+ PASSED();
+ return 0;
+
+error:
+ H5E_BEGIN_TRY {
+ H5Tclose(dtypeID1);
+ H5Tclose(dtypeID2);
+ } H5E_END_TRY;
+
+ H5_FAILED();
+ return 1;
+}
+
+/*-------------------------------------------------------------------------
+ * TestHDFFV_9758(): Test that a packet table with compound datatype which
+ * contains string type can be created and written correctly. (HDFFV-9758)
+ *
+ * Notes:
+ * Previously, data of the field that follows the string was read back
+ * as garbage when #pragma pack(1) is used.
+ * 2016/10/20 -BMR
+ * Updated:
+ * #pragma pack(1) caused failure on Emu because Sparc cannot
+ * access misaligned data. Changed it to pack() to do the
+ * default alignment.
+ * 2016/10/25 -BMR
+ *-------------------------------------------------------------------------
+ */
+#pragma pack() // default alignment
+const char* ABHI_PT("/abhiTest");
+const hsize_t NUM_PACKETS = 5;
+const int STRING_LENGTH = 19; // including terminating NULL
+int TestHDFFV_9758()
+{
+ hid_t strtype;
+ hid_t compound_type;
+ herr_t err;
+ struct s1_t
+ {
+ int a;
+ float b;
+ double c;
+ char d[STRING_LENGTH]; // null terminated string
+ int e;
+ };
+
+ s1_t s1[NUM_PACKETS];
+
+ for (hsize_t i = 0; i < NUM_PACKETS; i++)
+ {
+ s1[i].a = i;
+ s1[i].b = 1.f * static_cast<float>(i * i);
+ s1[i].c = 1. / (i + 1);
+ sprintf(s1[i].d, "string%d", (int)i);
+ s1[i].e = 100+i;
+ }
+
+ TESTING("data corruption in packed structs (HDFFV-9758)")
+
+ // Build a compound datatype
+ compound_type = H5Tcreate(H5T_COMPOUND, sizeof(s1_t));
+ if (compound_type < 0)
+ goto error;
+
+ err = H5Tinsert(compound_type, "a_name", HOFFSET(s1_t, a), H5T_NATIVE_INT);
+ if (err < 0)
+ goto error;
+ err = H5Tinsert(compound_type, "b_name", HOFFSET(s1_t, b), H5T_NATIVE_FLOAT);
+ if (err < 0)
+ goto error;
+ err = H5Tinsert(compound_type, "c_name", HOFFSET(s1_t, c), H5T_NATIVE_DOUBLE);
+ if (err < 0)
+ goto error;
+
+ strtype = H5Tcopy (H5T_C_S1);
+ if (compound_type < 0)
+ goto error;
+ err = H5Tset_size (strtype, STRING_LENGTH); /* create string */
+ if (err < 0)
+ goto error;
+ err = H5Tinsert(compound_type, "d_name", HOFFSET(s1_t, d), strtype);
+ if (err < 0)
+ goto error;
+ err = H5Tinsert(compound_type, "e_name", HOFFSET(s1_t, e), H5T_NATIVE_INT);
+ if (err < 0)
+ goto error;
+
+ { // so ptable will go out of scope before PASSED
+
+ // Create a packet table
+ FL_PacketTable ptable(fileID, "/examplePacketTable", compound_type, 1);
+ if (!ptable.IsValid())
+ goto error;
+
+ // Add packets to the table
+ for (size_t i = 0; i < NUM_PACKETS; i++)
+ {
+ /* Appends one packet at the current position */
+ err = ptable.AppendPacket(s1 + i);
+ if (err < 0) goto error;
+ }
+
+ // Check packet count
+ const hsize_t count = ptable.GetPacketCount(err);
+ if (err < 0)
+ goto error;
+
+ if (count != NUM_PACKETS)
+ {
+ std::cerr
+ << "Number of packets in packet table should be " << NUM_PACKETS
+ << " but is " << count << endl;
+ }
+
+ // Read and verify the data
+ ptable.ResetIndex();
+ for (size_t i = 0; i < NUM_PACKETS; i++)
+ {
+ s1_t s2;
+ memset(&s2, 0, sizeof(s1_t));
+ err = ptable.GetNextPacket(&s2);
+ if (err < 0)
+ goto error;
+
+ if (s2.a != s1[i].a || s2.e != s1[i].e)
+ goto error;
+ else if (HDstrcmp(s2.d, s1[i].d))
+ goto error;
+ }
+ } // end of ptable block
+
+ PASSED();
+ return 0;
+
+error:
+
+ H5E_BEGIN_TRY {
+ H5Tclose(strtype);
+ H5Tclose(compound_type);
+ H5Fclose(fileID);
+ } H5E_END_TRY;
+
+ H5_FAILED();
+ return 1;
+}
+
diff --git a/hl/c++/test/ptableTest.h b/hl/c++/test/ptableTest.h
new file mode 100644
index 0000000..8af7bff
--- /dev/null
+++ b/hl/c++/test/ptableTest.h
@@ -0,0 +1,57 @@
+/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
+ * Copyright by The HDF Group. *
+ * Copyright by the Board of Trustees of the University of Illinois. *
+ * All rights reserved. *
+ * *
+ * This file is part of HDF5. The full HDF5 copyright notice, including *
+ * terms governing use, modification, and redistribution, is contained in *
+ * the COPYING file, which can be found at the root of the source code *
+ * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. *
+ * If you do not have access to either file, you may request a copy from *
+ * help@hdfgroup.org. *
+ * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
+
+/* Test header for Packet Table C++ wrapper API */
+/* These tests are not as thorough as the tests for the C API because
+ * the C++ API is simply a wrapper. We don't need to test the
+ * actual Packet Table functionality, just that the C APIs are
+ * invoked correctly.
+ */
+
+#ifndef PTABLETEST
+#define PTABLETEST
+
+#include "H5PacketTable.h"
+#include "H5Cpp.h"
+#include "h5hltest.h"
+
+static hid_t fileID;
+
+/* Test some basic functionality; adding and getting records */
+int BasicTest(void);
+
+/* Test a compound fixed-length datatype */
+int TestCompoundDatatype(void);
+
+/* Test the GetNext functions and their indexes */
+int TestGetNext(void);
+
+/* Make sure that setting compression through the C++ API works. */
+int TestCompress(void);
+
+/* Ensure that the functions return the correct errors in
+ * response to invalid indexes */
+int TestErrors(void);
+
+/* Test getting multiple records at once using GetPacket */
+int TestGetPacket(void);
+
+/* Create two packet tables at once using compound datatypes.
+ Test for unusual interactions between multiple packet tables. */
+int SystemTest(void);
+
+/* Create a packet table with compound type, which has a string type. Verify
+ that data was written and read correctly. */
+int TestHDFFV_9758(void);
+
+#endif /* PTABLETEST */