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-rw-r--r--numpy/random/src/distributions/distributions.c316
1 files changed, 91 insertions, 225 deletions
diff --git a/numpy/random/src/distributions/distributions.c b/numpy/random/src/distributions/distributions.c
index 45f062c06..0b46dc6d8 100644
--- a/numpy/random/src/distributions/distributions.c
+++ b/numpy/random/src/distributions/distributions.c
@@ -1,4 +1,4 @@
-#include "distributions.h"
+#include "numpy/random/distributions.h"
#include "ziggurat_constants.h"
#include "logfactorial.h"
@@ -6,92 +6,42 @@
#include <intrin.h>
#endif
-/* Random generators for external use */
-float random_float(bitgen_t *bitgen_state) { return next_float(bitgen_state); }
-
-double random_double(bitgen_t *bitgen_state) {
- return next_double(bitgen_state);
+/* Inline generators for internal use */
+static NPY_INLINE uint32_t next_uint32(bitgen_t *bitgen_state) {
+ return bitgen_state->next_uint32(bitgen_state->state);
}
-
-static NPY_INLINE double next_standard_exponential(bitgen_t *bitgen_state) {
- return -log(1.0 - next_double(bitgen_state));
+static NPY_INLINE uint64_t next_uint64(bitgen_t *bitgen_state) {
+ return bitgen_state->next_uint64(bitgen_state->state);
}
-double random_standard_exponential(bitgen_t *bitgen_state) {
- return next_standard_exponential(bitgen_state);
+static NPY_INLINE float next_float(bitgen_t *bitgen_state) {
+ return (next_uint32(bitgen_state) >> 9) * (1.0f / 8388608.0f);
}
-void random_standard_exponential_fill(bitgen_t *bitgen_state, npy_intp cnt,
- double *out) {
- npy_intp i;
- for (i = 0; i < cnt; i++) {
- out[i] = next_standard_exponential(bitgen_state);
- }
+/* Random generators for external use */
+float random_standard_uniform_f(bitgen_t *bitgen_state) {
+ return next_float(bitgen_state);
}
-float random_standard_exponential_f(bitgen_t *bitgen_state) {
- return -logf(1.0f - next_float(bitgen_state));
+double random_standard_uniform(bitgen_t *bitgen_state) {
+ return next_double(bitgen_state);
}
-void random_double_fill(bitgen_t *bitgen_state, npy_intp cnt, double *out) {
+void random_standard_uniform_fill(bitgen_t *bitgen_state, npy_intp cnt, double *out) {
npy_intp i;
for (i = 0; i < cnt; i++) {
out[i] = next_double(bitgen_state);
}
}
-#if 0
-double random_gauss(bitgen_t *bitgen_state) {
- if (bitgen_state->has_gauss) {
- const double temp = bitgen_state->gauss;
- bitgen_state->has_gauss = false;
- bitgen_state->gauss = 0.0;
- return temp;
- } else {
- double f, x1, x2, r2;
-
- do {
- x1 = 2.0 * next_double(bitgen_state) - 1.0;
- x2 = 2.0 * next_double(bitgen_state) - 1.0;
- r2 = x1 * x1 + x2 * x2;
- } while (r2 >= 1.0 || r2 == 0.0);
-
- /* Polar method, a more efficient version of the Box-Muller approach. */
- f = sqrt(-2.0 * log(r2) / r2);
- /* Keep for next call */
- bitgen_state->gauss = f * x1;
- bitgen_state->has_gauss = true;
- return f * x2;
- }
-}
-float random_gauss_f(bitgen_t *bitgen_state) {
- if (bitgen_state->has_gauss_f) {
- const float temp = bitgen_state->gauss_f;
- bitgen_state->has_gauss_f = false;
- bitgen_state->gauss_f = 0.0f;
- return temp;
- } else {
- float f, x1, x2, r2;
-
- do {
- x1 = 2.0f * next_float(bitgen_state) - 1.0f;
- x2 = 2.0f * next_float(bitgen_state) - 1.0f;
- r2 = x1 * x1 + x2 * x2;
- } while (r2 >= 1.0 || r2 == 0.0);
-
- /* Polar method, a more efficient version of the Box-Muller approach. */
- f = sqrtf(-2.0f * logf(r2) / r2);
- /* Keep for next call */
- bitgen_state->gauss_f = f * x1;
- bitgen_state->has_gauss_f = true;
- return f * x2;
+void random_standard_uniform_fill_f(bitgen_t *bitgen_state, npy_intp cnt, float *out) {
+ npy_intp i;
+ for (i = 0; i < cnt; i++) {
+ out[i] = next_float(bitgen_state);
}
}
-#endif
-
-static NPY_INLINE double standard_exponential_zig(bitgen_t *bitgen_state);
-static double standard_exponential_zig_unlikely(bitgen_t *bitgen_state,
+static double standard_exponential_unlikely(bitgen_t *bitgen_state,
uint8_t idx, double x) {
if (idx == 0) {
/* Switch to 1.0 - U to avoid log(0.0), see GH 13361 */
@@ -101,11 +51,11 @@ static double standard_exponential_zig_unlikely(bitgen_t *bitgen_state,
exp(-x)) {
return x;
} else {
- return standard_exponential_zig(bitgen_state);
+ return random_standard_exponential(bitgen_state);
}
}
-static NPY_INLINE double standard_exponential_zig(bitgen_t *bitgen_state) {
+double random_standard_exponential(bitgen_t *bitgen_state) {
uint64_t ri;
uint8_t idx;
double x;
@@ -117,24 +67,18 @@ static NPY_INLINE double standard_exponential_zig(bitgen_t *bitgen_state) {
if (ri < ke_double[idx]) {
return x; /* 98.9% of the time we return here 1st try */
}
- return standard_exponential_zig_unlikely(bitgen_state, idx, x);
+ return standard_exponential_unlikely(bitgen_state, idx, x);
}
-double random_standard_exponential_zig(bitgen_t *bitgen_state) {
- return standard_exponential_zig(bitgen_state);
-}
-
-void random_standard_exponential_zig_fill(bitgen_t *bitgen_state, npy_intp cnt,
- double *out) {
+void random_standard_exponential_fill(bitgen_t * bitgen_state, npy_intp cnt, double * out)
+{
npy_intp i;
for (i = 0; i < cnt; i++) {
- out[i] = standard_exponential_zig(bitgen_state);
+ out[i] = random_standard_exponential(bitgen_state);
}
}
-static NPY_INLINE float standard_exponential_zig_f(bitgen_t *bitgen_state);
-
-static float standard_exponential_zig_unlikely_f(bitgen_t *bitgen_state,
+static float standard_exponential_unlikely_f(bitgen_t *bitgen_state,
uint8_t idx, float x) {
if (idx == 0) {
/* Switch to 1.0 - U to avoid log(0.0), see GH 13361 */
@@ -144,11 +88,11 @@ static float standard_exponential_zig_unlikely_f(bitgen_t *bitgen_state,
expf(-x)) {
return x;
} else {
- return standard_exponential_zig_f(bitgen_state);
+ return random_standard_exponential_f(bitgen_state);
}
}
-static NPY_INLINE float standard_exponential_zig_f(bitgen_t *bitgen_state) {
+float random_standard_exponential_f(bitgen_t *bitgen_state) {
uint32_t ri;
uint8_t idx;
float x;
@@ -160,14 +104,35 @@ static NPY_INLINE float standard_exponential_zig_f(bitgen_t *bitgen_state) {
if (ri < ke_float[idx]) {
return x; /* 98.9% of the time we return here 1st try */
}
- return standard_exponential_zig_unlikely_f(bitgen_state, idx, x);
+ return standard_exponential_unlikely_f(bitgen_state, idx, x);
}
-float random_standard_exponential_zig_f(bitgen_t *bitgen_state) {
- return standard_exponential_zig_f(bitgen_state);
+void random_standard_exponential_fill_f(bitgen_t * bitgen_state, npy_intp cnt, float * out)
+{
+ npy_intp i;
+ for (i = 0; i < cnt; i++) {
+ out[i] = random_standard_exponential_f(bitgen_state);
+ }
}
-static NPY_INLINE double next_gauss_zig(bitgen_t *bitgen_state) {
+void random_standard_exponential_inv_fill(bitgen_t * bitgen_state, npy_intp cnt, double * out)
+{
+ npy_intp i;
+ for (i = 0; i < cnt; i++) {
+ out[i] = -log(1.0 - next_double(bitgen_state));
+ }
+}
+
+void random_standard_exponential_inv_fill_f(bitgen_t * bitgen_state, npy_intp cnt, float * out)
+{
+ npy_intp i;
+ for (i = 0; i < cnt; i++) {
+ out[i] = -log(1.0 - next_float(bitgen_state));
+ }
+}
+
+
+double random_standard_normal(bitgen_t *bitgen_state) {
uint64_t r;
int sign;
uint64_t rabs;
@@ -202,18 +167,14 @@ static NPY_INLINE double next_gauss_zig(bitgen_t *bitgen_state) {
}
}
-double random_gauss_zig(bitgen_t *bitgen_state) {
- return next_gauss_zig(bitgen_state);
-}
-
-void random_gauss_zig_fill(bitgen_t *bitgen_state, npy_intp cnt, double *out) {
+void random_standard_normal_fill(bitgen_t *bitgen_state, npy_intp cnt, double *out) {
npy_intp i;
for (i = 0; i < cnt; i++) {
- out[i] = next_gauss_zig(bitgen_state);
+ out[i] = random_standard_normal(bitgen_state);
}
}
-float random_gauss_zig_f(bitgen_t *bitgen_state) {
+float random_standard_normal_f(bitgen_t *bitgen_state) {
uint32_t r;
int sign;
uint32_t rabs;
@@ -247,113 +208,26 @@ float random_gauss_zig_f(bitgen_t *bitgen_state) {
}
}
-/*
-static NPY_INLINE double standard_gamma(bitgen_t *bitgen_state, double shape) {
- double b, c;
- double U, V, X, Y;
-
- if (shape == 1.0) {
- return random_standard_exponential(bitgen_state);
- } else if (shape < 1.0) {
- for (;;) {
- U = next_double(bitgen_state);
- V = random_standard_exponential(bitgen_state);
- if (U <= 1.0 - shape) {
- X = pow(U, 1. / shape);
- if (X <= V) {
- return X;
- }
- } else {
- Y = -log((1 - U) / shape);
- X = pow(1.0 - shape + shape * Y, 1. / shape);
- if (X <= (V + Y)) {
- return X;
- }
- }
- }
- } else {
- b = shape - 1. / 3.;
- c = 1. / sqrt(9 * b);
- for (;;) {
- do {
- X = random_gauss(bitgen_state);
- V = 1.0 + c * X;
- } while (V <= 0.0);
-
- V = V * V * V;
- U = next_double(bitgen_state);
- if (U < 1.0 - 0.0331 * (X * X) * (X * X))
- return (b * V);
- if (log(U) < 0.5 * X * X + b * (1. - V + log(V)))
- return (b * V);
- }
- }
-}
-
-static NPY_INLINE float standard_gamma_float(bitgen_t *bitgen_state, float
-shape) { float b, c; float U, V, X, Y;
-
- if (shape == 1.0f) {
- return random_standard_exponential_f(bitgen_state);
- } else if (shape < 1.0f) {
- for (;;) {
- U = next_float(bitgen_state);
- V = random_standard_exponential_f(bitgen_state);
- if (U <= 1.0f - shape) {
- X = powf(U, 1.0f / shape);
- if (X <= V) {
- return X;
- }
- } else {
- Y = -logf((1.0f - U) / shape);
- X = powf(1.0f - shape + shape * Y, 1.0f / shape);
- if (X <= (V + Y)) {
- return X;
- }
- }
- }
- } else {
- b = shape - 1.0f / 3.0f;
- c = 1.0f / sqrtf(9.0f * b);
- for (;;) {
- do {
- X = random_gauss_f(bitgen_state);
- V = 1.0f + c * X;
- } while (V <= 0.0f);
-
- V = V * V * V;
- U = next_float(bitgen_state);
- if (U < 1.0f - 0.0331f * (X * X) * (X * X))
- return (b * V);
- if (logf(U) < 0.5f * X * X + b * (1.0f - V + logf(V)))
- return (b * V);
- }
+void random_standard_normal_fill_f(bitgen_t *bitgen_state, npy_intp cnt, float *out) {
+ npy_intp i;
+ for (i = 0; i < cnt; i++) {
+ out[i] = random_standard_normal_f(bitgen_state);
}
}
-
-double random_standard_gamma(bitgen_t *bitgen_state, double shape) {
- return standard_gamma(bitgen_state, shape);
-}
-
-float random_standard_gamma_f(bitgen_t *bitgen_state, float shape) {
- return standard_gamma_float(bitgen_state, shape);
-}
-*/
-
-static NPY_INLINE double standard_gamma_zig(bitgen_t *bitgen_state,
+double random_standard_gamma(bitgen_t *bitgen_state,
double shape) {
double b, c;
double U, V, X, Y;
if (shape == 1.0) {
- return random_standard_exponential_zig(bitgen_state);
+ return random_standard_exponential(bitgen_state);
} else if (shape == 0.0) {
return 0.0;
} else if (shape < 1.0) {
for (;;) {
U = next_double(bitgen_state);
- V = random_standard_exponential_zig(bitgen_state);
+ V = random_standard_exponential(bitgen_state);
if (U <= 1.0 - shape) {
X = pow(U, 1. / shape);
if (X <= V) {
@@ -372,7 +246,7 @@ static NPY_INLINE double standard_gamma_zig(bitgen_t *bitgen_state,
c = 1. / sqrt(9 * b);
for (;;) {
do {
- X = random_gauss_zig(bitgen_state);
+ X = random_standard_normal(bitgen_state);
V = 1.0 + c * X;
} while (V <= 0.0);
@@ -387,19 +261,19 @@ static NPY_INLINE double standard_gamma_zig(bitgen_t *bitgen_state,
}
}
-static NPY_INLINE float standard_gamma_zig_f(bitgen_t *bitgen_state,
+float random_standard_gamma_f(bitgen_t *bitgen_state,
float shape) {
float b, c;
float U, V, X, Y;
if (shape == 1.0f) {
- return random_standard_exponential_zig_f(bitgen_state);
+ return random_standard_exponential_f(bitgen_state);
} else if (shape == 0.0) {
return 0.0;
} else if (shape < 1.0f) {
for (;;) {
U = next_float(bitgen_state);
- V = random_standard_exponential_zig_f(bitgen_state);
+ V = random_standard_exponential_f(bitgen_state);
if (U <= 1.0f - shape) {
X = powf(U, 1.0f / shape);
if (X <= V) {
@@ -418,7 +292,7 @@ static NPY_INLINE float standard_gamma_zig_f(bitgen_t *bitgen_state,
c = 1.0f / sqrtf(9.0f * b);
for (;;) {
do {
- X = random_gauss_zig_f(bitgen_state);
+ X = random_standard_normal_f(bitgen_state);
V = 1.0f + c * X;
} while (V <= 0.0f);
@@ -433,14 +307,6 @@ static NPY_INLINE float standard_gamma_zig_f(bitgen_t *bitgen_state,
}
}
-double random_standard_gamma_zig(bitgen_t *bitgen_state, double shape) {
- return standard_gamma_zig(bitgen_state, shape);
-}
-
-float random_standard_gamma_zig_f(bitgen_t *bitgen_state, float shape) {
- return standard_gamma_zig_f(bitgen_state, shape);
-}
-
int64_t random_positive_int64(bitgen_t *bitgen_state) {
return next_uint64(bitgen_state) >> 1;
}
@@ -470,10 +336,10 @@ uint64_t random_uint(bitgen_t *bitgen_state) {
* algorithm comes from SPECFUN by Shanjie Zhang and Jianming Jin and their
* book "Computation of Special Functions", 1996, John Wiley & Sons, Inc.
*
- * If loggam(k+1) is being used to compute log(k!) for an integer k, consider
+ * If random_loggam(k+1) is being used to compute log(k!) for an integer k, consider
* using logfactorial(k) instead.
*/
-double loggam(double x) {
+double random_loggam(double x) {
double x0, x2, xp, gl, gl0;
RAND_INT_TYPE k, n;
@@ -513,12 +379,12 @@ double random_normal(bitgen_t *bitgen_state, double loc, double scale) {
}
*/
-double random_normal_zig(bitgen_t *bitgen_state, double loc, double scale) {
- return loc + scale * random_gauss_zig(bitgen_state);
+double random_normal(bitgen_t *bitgen_state, double loc, double scale) {
+ return loc + scale * random_standard_normal(bitgen_state);
}
double random_exponential(bitgen_t *bitgen_state, double scale) {
- return scale * standard_exponential_zig(bitgen_state);
+ return scale * random_standard_exponential(bitgen_state);
}
double random_uniform(bitgen_t *bitgen_state, double lower, double range) {
@@ -526,11 +392,11 @@ double random_uniform(bitgen_t *bitgen_state, double lower, double range) {
}
double random_gamma(bitgen_t *bitgen_state, double shape, double scale) {
- return scale * random_standard_gamma_zig(bitgen_state, shape);
+ return scale * random_standard_gamma(bitgen_state, shape);
}
-float random_gamma_float(bitgen_t *bitgen_state, float shape, float scale) {
- return scale * random_standard_gamma_zig_f(bitgen_state, shape);
+float random_gamma_f(bitgen_t *bitgen_state, float shape, float scale) {
+ return scale * random_standard_gamma_f(bitgen_state, shape);
}
double random_beta(bitgen_t *bitgen_state, double a, double b) {
@@ -562,14 +428,14 @@ double random_beta(bitgen_t *bitgen_state, double a, double b) {
}
}
} else {
- Ga = random_standard_gamma_zig(bitgen_state, a);
- Gb = random_standard_gamma_zig(bitgen_state, b);
+ Ga = random_standard_gamma(bitgen_state, a);
+ Gb = random_standard_gamma(bitgen_state, b);
return Ga / (Ga + Gb);
}
}
double random_chisquare(bitgen_t *bitgen_state, double df) {
- return 2.0 * random_standard_gamma_zig(bitgen_state, df / 2.0);
+ return 2.0 * random_standard_gamma(bitgen_state, df / 2.0);
}
double random_f(bitgen_t *bitgen_state, double dfnum, double dfden) {
@@ -578,22 +444,22 @@ double random_f(bitgen_t *bitgen_state, double dfnum, double dfden) {
}
double random_standard_cauchy(bitgen_t *bitgen_state) {
- return random_gauss_zig(bitgen_state) / random_gauss_zig(bitgen_state);
+ return random_standard_normal(bitgen_state) / random_standard_normal(bitgen_state);
}
double random_pareto(bitgen_t *bitgen_state, double a) {
- return exp(standard_exponential_zig(bitgen_state) / a) - 1;
+ return exp(random_standard_exponential(bitgen_state) / a) - 1;
}
double random_weibull(bitgen_t *bitgen_state, double a) {
if (a == 0.0) {
return 0.0;
}
- return pow(standard_exponential_zig(bitgen_state), 1. / a);
+ return pow(random_standard_exponential(bitgen_state), 1. / a);
}
double random_power(bitgen_t *bitgen_state, double a) {
- return pow(1 - exp(-standard_exponential_zig(bitgen_state)), 1. / a);
+ return pow(1 - exp(-random_standard_exponential(bitgen_state)), 1. / a);
}
double random_laplace(bitgen_t *bitgen_state, double loc, double scale) {
@@ -634,7 +500,7 @@ double random_logistic(bitgen_t *bitgen_state, double loc, double scale) {
}
double random_lognormal(bitgen_t *bitgen_state, double mean, double sigma) {
- return exp(random_normal_zig(bitgen_state, mean, sigma));
+ return exp(random_normal(bitgen_state, mean, sigma));
}
double random_rayleigh(bitgen_t *bitgen_state, double mode) {
@@ -644,8 +510,8 @@ double random_rayleigh(bitgen_t *bitgen_state, double mode) {
double random_standard_t(bitgen_t *bitgen_state, double df) {
double num, denom;
- num = random_gauss_zig(bitgen_state);
- denom = random_standard_gamma_zig(bitgen_state, df / 2);
+ num = random_standard_normal(bitgen_state);
+ denom = random_standard_gamma(bitgen_state, df / 2);
return sqrt(df / 2) * num / sqrt(denom);
}
@@ -699,7 +565,7 @@ static RAND_INT_TYPE random_poisson_ptrs(bitgen_t *bitgen_state, double lam) {
/* log(V) == log(0.0) ok here */
/* if U==0.0 so that us==0.0, log is ok since always returns */
if ((log(V) + log(invalpha) - log(a / (us * us) + b)) <=
- (-lam + k * loglam - loggam(k + 1))) {
+ (-lam + k * loglam - random_loggam(k + 1))) {
return k;
}
}
@@ -934,7 +800,7 @@ double random_noncentral_chisquare(bitgen_t *bitgen_state, double df,
}
if (1 < df) {
const double Chi2 = random_chisquare(bitgen_state, df - 1);
- const double n = random_gauss_zig(bitgen_state) + sqrt(nonc);
+ const double n = random_standard_normal(bitgen_state) + sqrt(nonc);
return Chi2 + n * n;
} else {
const RAND_INT_TYPE i = random_poisson(bitgen_state, nonc / 2.0);
@@ -953,7 +819,7 @@ double random_wald(bitgen_t *bitgen_state, double mean, double scale) {
double mu_2l;
mu_2l = mean / (2 * scale);
- Y = random_gauss_zig(bitgen_state);
+ Y = random_standard_normal(bitgen_state);
Y = mean * Y * Y;
X = mean + mu_2l * (Y - sqrt(4 * scale * Y + Y * Y));
U = next_double(bitgen_state);
@@ -1092,8 +958,8 @@ RAND_INT_TYPE random_zipf(bitgen_t *bitgen_state, double a) {
while (1) {
double T, U, V, X;
- U = 1.0 - random_double(bitgen_state);
- V = random_double(bitgen_state);
+ U = 1.0 - next_double(bitgen_state);
+ V = next_double(bitgen_state);
X = floor(pow(U, -1.0 / am1));
/*
* The real result may be above what can be represented in a signed