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authorEric Wieser <wieser.eric@gmail.com>2017-01-03 00:56:10 +0000
committerEric Wieser <wieser.eric@gmail.com>2017-02-11 21:09:09 +0000
commit9f362bfb3f99c0bcb30e9bd6e568e40ae5a0cf7b (patch)
treefdc72ba99dca4388e1c45aeb5f217c86928a2f65 /numpy/lib
parentb10b6c290ded55e410543b9d09686042be3db6ec (diff)
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BUG: Work around evil matrix.__array_prepare__
Diffstat (limited to 'numpy/lib')
-rw-r--r--numpy/lib/shape_base.py7
-rw-r--r--numpy/lib/tests/test_shape_base.py12
2 files changed, 15 insertions, 4 deletions
diff --git a/numpy/lib/shape_base.py b/numpy/lib/shape_base.py
index 7e70904b1..120153ad5 100644
--- a/numpy/lib/shape_base.py
+++ b/numpy/lib/shape_base.py
@@ -9,6 +9,7 @@ from numpy.core.numeric import (
from numpy.core.fromnumeric import product, reshape, transpose
from numpy.core import vstack, atleast_3d
from numpy.lib.index_tricks import ndindex
+from numpy.matrixlib.defmatrix import matrix # this raises all the right alarm bells
__all__ = [
@@ -116,7 +117,11 @@ def apply_along_axis(func1d, axis, arr, *args, **kwargs):
# insert as many axes as necessary to create the output
outshape = arr.shape[:axis] + res.shape + arr.shape[axis+1:]
outarr = zeros(outshape, res.dtype)
- outarr = res.__array_prepare__(outarr)
+ # matrices call reshape in __array_prepare__, and this is apparently ok!
+ if not isinstance(res, matrix):
+ outarr = res.__array_prepare__(outarr)
+ if outshape != outarr.shape:
+ raise ValueError('__array_prepare__ should not change the shape of the resultant array')
# outarr, with inserted dimensions at the end
# this means that outarr_view[i] = func1d(inarr_view[i])
diff --git a/numpy/lib/tests/test_shape_base.py b/numpy/lib/tests/test_shape_base.py
index 7bf2b4a81..111f302aa 100644
--- a/numpy/lib/tests/test_shape_base.py
+++ b/numpy/lib/tests/test_shape_base.py
@@ -28,14 +28,20 @@ class TestApplyAlongAxis(TestCase):
[[27, 30, 33], [36, 39, 42], [45, 48, 51]])
def test_preserve_subclass(self):
+ # this test is particularly malicious because matrix
+ # refuses to become 1d
def double(row):
return row * 2
m = np.matrix([[0, 1], [2, 3]])
+ expected = np.matrix([[0, 2], [4, 6]])
+
result = apply_along_axis(double, 0, m)
assert_(isinstance(result, np.matrix))
- assert_array_equal(
- result, np.matrix([[0, 2], [4, 6]])
- )
+ assert_array_equal(result, expected)
+
+ result = apply_along_axis(double, 1, m)
+ assert_(isinstance(result, np.matrix))
+ assert_array_equal(result, expected)
def test_subclass(self):
class MinimalSubclass(np.ndarray):