1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
|
/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
* Copyright by The HDF Group. *
* Copyright by the Board of Trustees of the University of Illinois. *
* All rights reserved. *
* *
* This file is part of HDF5. The full HDF5 copyright notice, including *
* terms governing use, modification, and redistribution, is contained in *
* the COPYING file, which can be found at the root of the source code *
* distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. *
* If you do not have access to either file, you may request a copy from *
* help@hdfgroup.org. *
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
/*
* Programmer:
*
* Purpose: This file contains declarations which are visible only within
* the H5FA package. Source files outside the H5FA package should
* include H5FAprivate.h instead.
*/
#if !(defined(H5FA_FRIEND) | defined(H5FA_MODULE))
#error "Do not include this file outside the H5FA package!"
#endif
#ifndef _H5FApkg_H
#define _H5FApkg_H
/* Get package's private header */
#include "H5FAprivate.h"
/* Other private headers needed by this file */
#include "H5ACprivate.h" /* Metadata cache */
#include "H5FLprivate.h" /* Free Lists */
/**************************/
/* Package Private Macros */
/**************************/
/* Define this to display debugging information for the Fixed Array layer */
/* #define H5FA_DEBUG */
/* Fill value for fixed array test class */
#ifdef H5FA_TESTING
#define H5FA_TEST_FILL ((uint64_t)ULLONG_MAX)
#endif /* H5FA_TESTING */
/* Size of checksum information (on disk) */
#define H5FA_SIZEOF_CHKSUM 4
/* "Standard" size of prefix information for fixed array metadata */
#define H5FA_METADATA_PREFIX_SIZE(c) ( \
H5_SIZEOF_MAGIC /* Signature */ \
+ 1 /* Version */ \
+ 1 /* Array type */ \
+ ((c) ? H5FA_SIZEOF_CHKSUM : 0) /* Metadata checksum */ \
)
/* Size of the Fixed Array header on disk */
#define H5FA_HEADER_SIZE(sizeof_addr, sizeof_size) ( \
/* General metadata fields */ \
H5FA_METADATA_PREFIX_SIZE(TRUE) \
\
/* General array information */ \
+ 1 /* Element Size */ \
+ 1 /* Log2(Max. # of elements in data block page) - i.e. # of bits needed to store max. # of elements in data block page */ \
\
/* Fixed Array statistics fields */ \
+ (sizeof_size) /* # of elements in the fixed array */ \
\
/* Fixed Array Header specific fields */ \
+ (sizeof_addr) /* File address of Fixed Array data block */ \
)
/* Size of the fixed array header on disk (via file pointer) */
#define H5FA_HEADER_SIZE_FILE(f) ( \
H5FA_HEADER_SIZE(H5F_SIZEOF_ADDR(f), H5F_SIZEOF_SIZE(f)) \
)
/* Size of the fixed array header on disk (via fixed array header) */
#define H5FA_HEADER_SIZE_HDR(h) ( \
H5FA_HEADER_SIZE((h)->sizeof_addr, (h)->sizeof_size) \
)
/* Size of the Fixed Array data block prefix on disk */
#define H5FA_DBLOCK_PREFIX_SIZE(d) ( \
/* General metadata fields */ \
H5FA_METADATA_PREFIX_SIZE(TRUE) \
\
/* Sanity-checking fields */ \
+ (d)->hdr->sizeof_addr /* File address of Fixed Array header owning the data block */ \
\
/* Fixed Array Data Block specific fields */ \
+ (d)->dblk_page_init_size /* Fixed array data block 'page init' bitmasks (can be 0 if no pages) */ \
)
/* Size of the Fixed Array data block on disk */
#define H5FA_DBLOCK_SIZE(d) ( \
/* Data block prefix size */ \
H5FA_DBLOCK_PREFIX_SIZE(d) \
\
/* Fixed Array Elements|Pages of Elements*/ \
+ ((d)->hdr->cparam.nelmts * (size_t)(d)->hdr->cparam.raw_elmt_size) \
+ ((d)->npages * H5FA_SIZEOF_CHKSUM) /* Checksum */ \
)
/* Size of the Fixed Array data block page on disk */
#define H5FA_DBLK_PAGE_SIZE(h, nelmts) ( \
/* Fixed Array Data Block Page */ \
+ (nelmts * (size_t)(h)->cparam.raw_elmt_size) /* Elements in data block page */ \
+ H5FA_SIZEOF_CHKSUM /* Checksum for each page */ \
)
/****************************/
/* Package Private Typedefs */
/****************************/
/* The Fixed Array header information */
typedef struct H5FA_hdr_t {
/* Information for H5AC cache functions, _must_ be first field in structure */
H5AC_info_t cache_info;
/* Fixed array configuration/creation parameters (stored in header) */
H5FA_create_t cparam; /* Creation parameters for Fixed Array */
/* Fixed Array data block information (stored in header) */
haddr_t dblk_addr; /* Address of Fixed Array Data block */
/* Statistics for Fixed Array (stored in header) */
H5FA_stat_t stats; /* Statistcs for Fixed Array */
/* Computed/cached values (not stored in header) */
size_t rc; /* Reference count of the header */
haddr_t addr; /* Address of header in file */
size_t size; /* Size of header in file */
H5F_t *f; /* Pointer to file for fixed array */
size_t file_rc; /* Reference count of files using array header */
hbool_t pending_delete; /* Array is pending deletion */
size_t sizeof_addr; /* Size of file addresses */
size_t sizeof_size; /* Size of file sizes */
/* Client information (not stored) */
void *cb_ctx; /* Callback context */
/* SWMR / Flush dependency information (not stored) */
hbool_t swmr_write; /* Flag indicating the file is opened with SWMR-write access */
H5AC_proxy_entry_t *top_proxy; /* 'Top' proxy cache entry for all array entries */
void *parent; /* Pointer to 'top' proxy flush dependency
* parent, if it exists, otherwise NULL.
* If the fixed array is being used
* to index a chunked dataset and the
* dataset metadata is modified by a
* SWMR writer, this field will be set
* equal to the object header proxy
* that is the flush dependency parent
* of the fixed array header.
*
* The field is used to avoid duplicate
* setups of the flush dependency
* relationship, and to allow the
* fixed array header to destroy
* the flush dependency on receipt of
* an eviction notification from the
* metadata cache.
*/
} H5FA_hdr_t;
/* The fixed array data block information */
typedef struct H5FA_dblock_t {
/* Information for H5AC cache functions, _must_ be first field in structure */
H5AC_info_t cache_info;
/* Fixed array information (stored) */
uint8_t *dblk_page_init;/* Bitmap of whether a data block page is initialized */
void *elmts; /* Buffer for elements stored in data block */
/* Internal array information (not stored) */
H5FA_hdr_t *hdr; /* Shared array header info */
/* SWMR / Flush dependency information (not stored) */
H5AC_proxy_entry_t *top_proxy; /* 'Top' proxy cache entry for all array entries */
/* Computed/cached values (not stored) */
haddr_t addr; /* Address of this data block on disk */
hsize_t size; /* Size of data block on disk */
size_t npages; /* Nummber of pages in data block (zero if not paged) */
size_t last_page_nelmts; /* Nummber of elements in last page, if paged */
/* Fixed Array data block information (not stored) */
size_t dblk_page_nelmts; /* # of elements per data block page */
size_t dblk_page_size; /* Size of a data block page */
size_t dblk_page_init_size; /* Size of 'page init' bitmask */
} H5FA_dblock_t;
/* The fixed array data block page information */
typedef struct H5FA_dbk_page_t {
/* Information for H5AC cache functions, _must_ be first field in structure */
H5AC_info_t cache_info;
/* Fixed array information (stored) */
void *elmts; /* Buffer for elements stored in data block page */
/* Internal array information (not stored) */
H5FA_hdr_t *hdr; /* Shared array header info */
/* SWMR / Flush dependency information (not stored) */
H5AC_proxy_entry_t *top_proxy; /* 'Top' proxy cache entry for all array entries */
/* Computed/cached values (not stored) */
haddr_t addr; /* Address of this data block page on disk */
size_t size; /* Size of data block page on disk */
size_t nelmts; /* Number of elements in data block page */
} H5FA_dblk_page_t;
/* Fixed array */
struct H5FA_t {
H5FA_hdr_t *hdr; /* Pointer to internal fixed array header info */
H5F_t *f; /* Pointer to file for fixed array */
};
/* Metadata cache callback user data types */
/* Info needed for loading header */
typedef struct H5FA_hdr_cache_ud_t {
H5F_t *f; /* Pointer to file for fixed array */
haddr_t addr; /* Address of header on disk */
void *ctx_udata; /* User context for class */
} H5FA_hdr_cache_ud_t;
/* Info needed for loading data block */
typedef struct H5FA_dblock_cache_ud_t {
H5FA_hdr_t *hdr; /* Shared fixed array information */
haddr_t dblk_addr; /* Address of data block on disk */
} H5FA_dblock_cache_ud_t;
/* Info needed for loading data block page */
typedef struct H5FA_dblk_page_cache_ud_t {
H5FA_hdr_t *hdr; /* Shared fixed array information */
size_t nelmts; /* Number of elements in data block page */
haddr_t dblk_page_addr; /* Address of data block page on disk */
} H5FA_dblk_page_cache_ud_t;
/*****************************/
/* Package Private Variables */
/*****************************/
/* Internal fixed array testing class */
H5_DLLVAR const H5FA_class_t H5FA_CLS_TEST[1];
/* Array of fixed array client ID -> client class mappings */
H5_DLLVAR const H5FA_class_t *const H5FA_client_class_g[H5FA_NUM_CLS_ID];
/******************************/
/* Package Private Prototypes */
/******************************/
/* Generic routines */
H5_DLL herr_t H5FA__create_flush_depend(H5AC_info_t *parent_entry,
H5AC_info_t *child_entry);
H5_DLL herr_t H5FA__destroy_flush_depend(H5AC_info_t *parent_entry,
H5AC_info_t *child_entry);
/* Header routines */
H5_DLL H5FA_hdr_t *H5FA__hdr_alloc(H5F_t *f);
H5_DLL herr_t H5FA__hdr_init(H5FA_hdr_t *hdr, void *ctx_udata);
H5_DLL haddr_t H5FA__hdr_create(H5F_t *f, hid_t dxpl_id, const H5FA_create_t *cparam, void *ctx_udata);
H5_DLL void *H5FA__hdr_alloc_elmts(H5FA_hdr_t *hdr, size_t nelmts);
H5_DLL herr_t H5FA__hdr_free_elmts(H5FA_hdr_t *hdr, size_t nelmts, void *elmts);
H5_DLL herr_t H5FA__hdr_incr(H5FA_hdr_t *hdr);
H5_DLL herr_t H5FA__hdr_decr(H5FA_hdr_t *hdr);
H5_DLL herr_t H5FA__hdr_fuse_incr(H5FA_hdr_t *hdr);
H5_DLL size_t H5FA__hdr_fuse_decr(H5FA_hdr_t *hdr);
H5_DLL herr_t H5FA__hdr_modified(H5FA_hdr_t *hdr);
H5_DLL H5FA_hdr_t *H5FA__hdr_protect(H5F_t *f, hid_t dxpl_id, haddr_t fa_addr,
void *ctx_udata, unsigned flags);
H5_DLL herr_t H5FA__hdr_unprotect(H5FA_hdr_t *hdr, hid_t dxpl_id, unsigned cache_flags);
H5_DLL herr_t H5FA__hdr_delete(H5FA_hdr_t *hdr, hid_t dxpl_id);
H5_DLL herr_t H5FA__hdr_dest(H5FA_hdr_t *hdr);
/* Data block routines */
H5_DLL H5FA_dblock_t *H5FA__dblock_alloc(H5FA_hdr_t *hdr);
H5_DLL haddr_t H5FA__dblock_create(H5FA_hdr_t *hdr, hid_t dxpl_id, hbool_t *hdr_dirty);
H5_DLL unsigned H5FA__dblock_sblk_idx(const H5FA_hdr_t *hdr, hsize_t idx);
H5_DLL H5FA_dblock_t *H5FA__dblock_protect(H5FA_hdr_t *hdr, hid_t dxpl_id,
haddr_t dblk_addr, unsigned flags);
H5_DLL herr_t H5FA__dblock_unprotect(H5FA_dblock_t *dblock, hid_t dxpl_id,
unsigned cache_flags);
H5_DLL herr_t H5FA__dblock_delete(H5FA_hdr_t *hdr, hid_t dxpl_id,
haddr_t dblk_addr);
H5_DLL herr_t H5FA__dblock_dest(H5FA_dblock_t *dblock);
/* Data block page routines */
H5_DLL herr_t H5FA__dblk_page_create(H5FA_hdr_t *hdr, hid_t dxpl_id,
haddr_t addr, size_t nelmts);
H5_DLL H5FA_dblk_page_t *H5FA__dblk_page_alloc(H5FA_hdr_t *hdr, size_t nelmts);
H5_DLL H5FA_dblk_page_t *H5FA__dblk_page_protect(H5FA_hdr_t *hdr, hid_t dxpl_id,
haddr_t dblk_page_addr, size_t dblk_page_nelmts, unsigned flags);
H5_DLL herr_t H5FA__dblk_page_unprotect(H5FA_dblk_page_t *dblk_page,
hid_t dxpl_id, unsigned cache_flags);
H5_DLL herr_t H5FA__dblk_page_dest(H5FA_dblk_page_t *dblk_page);
/* Debugging routines for dumping file structures */
H5_DLL herr_t H5FA__hdr_debug(H5F_t *f, hid_t dxpl_id, haddr_t addr,
FILE *stream, int indent, int fwidth, const H5FA_class_t *cls, haddr_t obj_addr);
H5_DLL herr_t H5FA__dblock_debug(H5F_t *f, hid_t dxpl_id, haddr_t addr,
FILE *stream, int indent, int fwidth, const H5FA_class_t *cls,
haddr_t hdr_addr, haddr_t obj_addr);
/* Testing routines */
#ifdef H5FA_TESTING
H5_DLL herr_t H5FA_get_cparam_test(const H5FA_t *ea, H5FA_create_t *cparam);
H5_DLL int H5FA_cmp_cparam_test(const H5FA_create_t *cparam1, const H5FA_create_t *cparam2);
#endif /* H5FA_TESTING */
#endif /* _H5FApkg_H */
|
